Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005100-TA|BGIBMGA005100-PA|undefined
(67 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC23G7.11 |||DNA-3-methyladenine glycosidase Mag2 |Schizosacch... 26 0.71
SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase Ubp9|Schizosac... 26 0.71
SPCC777.11 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 25 0.93
SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr 2... 25 1.2
SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr... 24 2.2
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 24 2.9
SPBC30D10.17c |||glucan synthase regulator |Schizosaccharomyces ... 23 3.8
SPCC1020.10 |oca2||serine/threonine protein kinase Oca2 |Schizos... 23 3.8
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 23 3.8
SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar... 23 5.0
SPBC557.03c |pim1|dcd1, ptr2|GDP/GTP exchange factor |Schizosacc... 23 5.0
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 23 6.6
SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr 1|... 23 6.6
SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15 |Schizo... 23 6.6
SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S... 22 8.7
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 22 8.7
>SPBC23G7.11 |||DNA-3-methyladenine glycosidase Mag2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 213
Score = 25.8 bits (54), Expect = 0.71
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 7 NSDEHAFKLERLVTQLRSKFNGLQQTNGPDSLPSEPEHEP 46
+ D + E+ ++ + +K++ L + GP +L PEH P
Sbjct: 2 SKDSDYKRAEKHLSSIDNKWSSLVKKVGPCTLTPHPEHAP 41
>SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase
Ubp9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 585
Score = 25.8 bits (54), Expect = 0.71
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 19 VTQLRSKFNGLQQTNGPDSLPSEPEHE 45
+T+ RSKF G Q+N P P H+
Sbjct: 534 LTRKRSKFFGSSQSNSPKDSPLRDTHK 560
>SPCC777.11 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 128
Score = 25.4 bits (53), Expect = 0.93
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 15 LERLVTQ-LRSKFNGLQQTNGPDSLPSEPEHEP 46
+ERL T ++ F L +SLPS P+ EP
Sbjct: 63 IERLDTSFIKEPFRTLNHAINAESLPSLPDQEP 95
>SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 479
Score = 25.0 bits (52), Expect = 1.2
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Query: 34 GPDSLPSEPEHEPNA-RTRRTSLNS 57
GPD L EP + A R+R++SL+S
Sbjct: 250 GPDILEDEPSYSSRASRSRQSSLSS 274
>SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 24.2 bits (50), Expect = 2.2
Identities = 8/24 (33%), Positives = 17/24 (70%)
Query: 29 LQQTNGPDSLPSEPEHEPNARTRR 52
+Q+T+ ++ +EP +P+ R+RR
Sbjct: 552 IQETSEESTVVNEPNEKPDGRSRR 575
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 23.8 bits (49), Expect = 2.9
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 4 AKQNSDEHAFKLERLVTQLRSKFNGLQQTNGPDSLPSEPEH 44
+KQ SDE E L +Q + N ++ + P P+E +H
Sbjct: 650 SKQPSDEQHLGKESLPSQQSTVSNHHRKESIPSKQPTEGQH 690
>SPBC30D10.17c |||glucan synthase regulator |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 504
Score = 23.4 bits (48), Expect = 3.8
Identities = 13/51 (25%), Positives = 20/51 (39%)
Query: 7 NSDEHAFKLERLVTQLRSKFNGLQQTNGPDSLPSEPEHEPNARTRRTSLNS 57
+ DE K E L + N P +LP EP E + T++ +
Sbjct: 405 SKDEELIKKEELEADTDLGLINTSEINQPANLPDEPTAETSNPVSATTVEA 455
>SPCC1020.10 |oca2||serine/threonine protein kinase Oca2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 23.4 bits (48), Expect = 3.8
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 40 SEPEHEPNARTRRTSLNSTVVFGP 63
++ H PN++T +S + ++GP
Sbjct: 553 TDESHSPNSKTDNSSTHKQELYGP 576
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 23.4 bits (48), Expect = 3.8
Identities = 9/17 (52%), Positives = 9/17 (52%)
Query: 30 QQTNGPDSLPSEPEHEP 46
Q T P P EP HEP
Sbjct: 587 QTTEAPFEEPDEPAHEP 603
>SPBC26H8.09c |snf59||SWI/SNF complex subunit
Snf59|Schizosaccharomyces pombe|chr 2|||Manual
Length = 515
Score = 23.0 bits (47), Expect = 5.0
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 7 NSDEHAFKLERLVTQLRSKFN---GLQQTNGPD-SLPSEPEHEPNARTRRTSLNST 58
NS++ + L+ L K++ + TN D ++ EPEH N++ T+L+ +
Sbjct: 35 NSNKESTNLDDLNMLEEPKYHDNSNKESTNLDDLNMLEEPEHHDNSKKESTNLDDS 90
>SPBC557.03c |pim1|dcd1, ptr2|GDP/GTP exchange factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 539
Score = 23.0 bits (47), Expect = 5.0
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Query: 36 DSLPSEPEHEPNARTRRTSLNSTVVFGPVTD 66
+ + SEPE+E +T TS PVTD
Sbjct: 482 NGIKSEPENEKKLKTEETSKTDD---SPVTD 509
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 22.6 bits (46), Expect = 6.6
Identities = 10/29 (34%), Positives = 12/29 (41%)
Query: 35 PDSLPSEPEHEPNARTRRTSLNSTVVFGP 63
P S P EP S N+TV+ P
Sbjct: 857 PHSYLESPAPEPQPSYEEESFNATVIHAP 885
>SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1369
Score = 22.6 bits (46), Expect = 6.6
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 24 SKFNGLQQTNGPDSLPSEPEHEPNARTRRTSLN 56
SK L++ N S+PS PE++P + +LN
Sbjct: 43 SKITDLEK-NVDHSIPSFPENDPKNYSEFVNLN 74
>SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 534
Score = 22.6 bits (46), Expect = 6.6
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 29 LQQTNGPDSLPSEPEHEPNARTRRTSLNSTVVFGPV 64
L +N P + + + N R S + T +F PV
Sbjct: 8 LPLSNNPPAARTHDHSQRNNHARHVSSSGTTLFAPV 43
>SPCC1827.04 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 600
Score = 22.2 bits (45), Expect = 8.7
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 2 RKAKQNSDEHAFKLERLVTQL----RSKFNGLQQTNGPDSLPSEPEHEPNARTRRTSLNS 57
RK+ SD H F +R +T+L + +F + + + P+SL S E E N+ + +
Sbjct: 68 RKSHIKSDWHRFNTKRKITKLPPVSQDEFESIIE-DLPESL-SGSESETNSESEEDNFQI 125
Query: 58 TVVF 61
F
Sbjct: 126 EKAF 129
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 22.2 bits (45), Expect = 8.7
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 1 MRKAKQNSDEHAFKLERLVTQLRS 24
+ AK +SDE+A +++ L T+L S
Sbjct: 266 LTSAKVSSDEYARQVDTLDTKLNS 289
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.311 0.127 0.352
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 315,033
Number of Sequences: 5004
Number of extensions: 10409
Number of successful extensions: 35
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 23
Number of HSP's gapped (non-prelim): 17
length of query: 67
length of database: 2,362,478
effective HSP length: 47
effective length of query: 20
effective length of database: 2,127,290
effective search space: 42545800
effective search space used: 42545800
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 45 (22.2 bits)
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