GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005097-TA|BGIBMGA005097-PA|undefined
         (357 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    26   0.43 
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    24   2.3  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    23   3.1  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    23   5.3  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    22   7.1  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   9.3  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 26.2 bits (55), Expect = 0.43
 Identities = 27/123 (21%), Positives = 47/123 (38%), Gaps = 6/123 (4%)

Query: 208 RSDEIDDSNSPFIPISDELPVLEPAVMWGALPDSVSQARPQPSETHTSPAPALQRLLTGP 267
           R  ++D  +   I    E P    +    + P SV  + P+  +      P L+R+L  P
Sbjct: 570 RFRKLDSPSDSGIESGTEKPDKPASSSASSAPTSVCSS-PRSEDKEVEDMPVLKRVLQAP 628

Query: 268 PPQDLITSIYSDQGLMPS---RSISTWDTGVKRVMKEEEEPSAKRVKRSPSPVAPKPKSQ 324
           P  D  T+   D+   P    R++   D+         +   ++      SP A  P SQ
Sbjct: 629 PLYD--TNSLMDEAYKPHKKFRALRQKDSAEAEPAVIVQHTQSQLHLHLTSPPARSPSSQ 686

Query: 325 SSS 327
           + +
Sbjct: 687 AQA 689



 Score = 25.4 bits (53), Expect = 0.76
 Identities = 8/37 (21%), Positives = 21/37 (56%)

Query: 292 DTGVKRVMKEEEEPSAKRVKRSPSPVAPKPKSQSSSV 328
           D+G++   ++ ++P++     +P+ V   P+S+   V
Sbjct: 579 DSGIESGTEKPDKPASSSASSAPTSVCSSPRSEDKEV 615


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 290 TWDTGVKRVMKEEEEPSAKRVKRSPSPVAPKPK 322
           T  T ++R  K E EP   R    P P  P P+
Sbjct: 26  TRPTRLRREAKPEAEPGNNRPVYIPQPRPPHPR 58


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query: 293 TGVKRVMKEEEEPSAKRVKRSPSPVAPKPK 322
           T ++R  K E EP   R    P P  P P+
Sbjct: 1   TRLRREAKPEAEPGNNRPVYIPQPRPPHPR 30



 Score = 22.2 bits (45), Expect = 7.1
 Identities = 10/28 (35%), Positives = 13/28 (46%)

Query: 295 VKRVMKEEEEPSAKRVKRSPSPVAPKPK 322
           ++R  K E EP   R    P P  P P+
Sbjct: 143 LRREAKPEAEPGNNRPVYIPQPRPPHPR 170


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 15  VRNAHYSSEAVDHGTGIE 32
           +RNA Y     DHG+G++
Sbjct: 88  MRNATYYQHQQDHGSGMD 105


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 7.1
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 290 TWDTGVKRVMKEEEEPSAKRVKRSPSPVAPKPK 322
           T  T ++R  + E EP   R    P P  P P+
Sbjct: 27  TRPTRLRREAEPEAEPGNNRPVYIPQPRPPHPR 59


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 10/28 (35%), Positives = 13/28 (46%)

Query: 295 VKRVMKEEEEPSAKRVKRSPSPVAPKPK 322
           ++R  K E EP   R    P P  P P+
Sbjct: 32  LRREAKPEAEPGNNRPIYIPQPRPPHPR 59


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.314    0.130    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,154
Number of Sequences: 429
Number of extensions: 4101
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 11
length of query: 357
length of database: 140,377
effective HSP length: 58
effective length of query: 299
effective length of database: 115,495
effective search space: 34533005
effective search space used: 34533005
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 44 (21.8 bits)