GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005091-TA|BGIBMGA005091-PA|IPR000209|Peptidase S8 and
S53, subtilisin, kexin, sedolisin, IPR008979|Galactose-binding like,
IPR002884|Proprotein convertase, P
         (558 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee preprosec...    27   0.31 
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    27   0.54 
AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.      25   2.2  

>M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee
          preprosecapin mRNA, complete cds. ).
          Length = 77

 Score = 27.5 bits (58), Expect = 0.31
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 1  MFAIIAILSVKPEQAYRMMNAEASYDFSSNDPFPYPRYTDD 41
          +F+ + IL + P +   + N   S +  S D  P PRY  D
Sbjct: 16 LFSFVVILLIIPSKCEAVSNDRQSLEARSADLVPEPRYIID 56


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 26.6 bits (56), Expect = 0.54
 Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 4/92 (4%)

Query: 358 HWTMNGVGLEFNHLFGFGVLDAGAMTALAANWRSVPPRYHCEAGSVNTHTEIPTDGSVTL 417
           +W MNG   E N + GF  L  G + +       VP  Y   A ++     I   G  T 
Sbjct: 10  NWKMNGTKSEINDIVGF--LKKGPLDSNVEVVVGVPSIYLTYAKNI-LPNNISIAGQNTY 66

Query: 418 KIDTTACAGSPSEVRYLEH-VQAVVSANGTRR 448
           K+   A  G  S    L++ +  V+  +  RR
Sbjct: 67  KVAKGAFTGEISPAMLLDNGIPWVILGHSERR 98


>AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.
          Length = 77

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 1  MFAIIAILSVKPEQAYRMMNAEASYDFSSNDPFPYPRYTDD 41
          +F+ + IL + P +   + N     +  S D  P PRY  D
Sbjct: 16 LFSFVVILLIIPSKCEAVSNDMQPLEARSADLVPEPRYIID 56


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.133    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,221
Number of Sequences: 429
Number of extensions: 5986
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 3
length of query: 558
length of database: 140,377
effective HSP length: 61
effective length of query: 497
effective length of database: 114,208
effective search space: 56761376
effective search space used: 56761376
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 46 (22.6 bits)