Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005076-TA|BGIBMGA005076-PA|IPR009316|COG complex
component, COG2
(645 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 27 0.48
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 25 2.5
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 24 3.4
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 24 4.4
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 24 4.4
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 24 4.4
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 23 5.9
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 23 5.9
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 23 7.8
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 27.1 bits (57), Expect = 0.48
Identities = 19/90 (21%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 516 CAYIDTVSNALREFNEDASKRLDQSNLSELYEDLFSVLTVSYHRNVEDILTSVQ-KTEDS 574
C +D+++ +R FNE ++R +E Y + T + + + + +++Q KT+
Sbjct: 356 CLCLDSMNAVIRNFNESENRRNSCLGSTETYYSKHN--TQQFTQYIPESSSNLQEKTKID 413
Query: 575 LRRLKQIREVAS-QQNPEIGITDGDKIRLQ 603
L + IR+++ + + D + LQ
Sbjct: 414 LLEIPPIRKISDCSTTSSLSGDESDVVELQ 443
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 24.6 bits (51), Expect = 2.5
Identities = 23/103 (22%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Query: 21 NKDYANFVNLCATLIGFDKAIAKVHVPLEQLNKDVLNVKRSLEDAMKETSMWMSQRHNLQ 80
++D +N N T+I DK + + +L K L + R L TS+ + +R +
Sbjct: 87 SRDKSNTSNTSKTIILSDKGPEGIQINATELQKIKLEIHRDLPGKSTTTSVEV-KRDIIN 145
Query: 81 SKKQLL----KYYSQTINSLNRLDNVLQNITEQKMYDKIVLAD 119
+ +L S+ I + NVL I + + +D +++ +
Sbjct: 146 PEDVILIRRTGEGSKPIFEREEIKNVLTKINKIEEHDTVLVVN 188
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 24.2 bits (50), Expect = 3.4
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 9/61 (14%)
Query: 81 SKKQLLKYYSQTINSLN-RLDNVLQNITEQKMYDKIVLADRAAMQYNQLKFTIKKCDNLV 139
S + KY+ QT+N LN L+ V + +T Y ++ M N +K + C +L+
Sbjct: 41 SNNKSKKYFEQTLNELNFNLNYVNKGVT----YKHTII----EMDSNPIKTALSVCKSLI 92
Query: 140 K 140
+
Sbjct: 93 E 93
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 4.4
Identities = 17/106 (16%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Query: 38 DKAIAKVHVPLEQLNKDVLNVKRSLEDAMKETSMWMSQR-HNLQSKKQLLKYYSQTINSL 96
D+ K+H E+L ++ N KR+ +E + + ++R + + + +T
Sbjct: 15 DRRYEKLHNEKEKLLEERTNRKRNSRSREREQNSYKNEREYRKYRETSKERSRDRTERER 74
Query: 97 NRLDNVLQNITEQKMYDKIVLADRAAMQYNQLKFTIKKCDNLVKLE 142
+R ++ +++ +++ + YN + K N++ +E
Sbjct: 75 SREPKIISSLSNNTIHNNNYKYNYNNNNYNNNNYNKKLYYNIINIE 120
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 23.8 bits (49), Expect = 4.4
Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 333 RFQEIAGSYEGSLHNDPF-IESSDGFI 358
R + S G++HNDP +E++ G +
Sbjct: 21 RGNAVPSSQRGNVHNDPLVVETTSGLV 47
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 23.8 bits (49), Expect = 4.4
Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 333 RFQEIAGSYEGSLHNDPF-IESSDGFI 358
R + S G++HNDP +E++ G +
Sbjct: 21 RGNAVPSSQRGNVHNDPLVVETTSGLV 47
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 23.4 bits (48), Expect = 5.9
Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Query: 48 LEQLNKDVLNVKRSLEDAMKETSMWMSQRHNLQSKKQLLKYYSQTINSLNRLDNVLQNIT 107
L LN D+ NVK +L+ + + N+ K + Y S+N ++N
Sbjct: 391 LRALN-DLYNVKNTLDSYNGSMEINQNIAQNIDHAKNTIIDYRNNDLSINEEKRTIENEQ 449
Query: 108 EQKMY 112
+MY
Sbjct: 450 LNRMY 454
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 23.4 bits (48), Expect = 5.9
Identities = 10/58 (17%), Positives = 32/58 (55%)
Query: 452 LEIENNELLRKSLQSSKESLRAVHKRIKEFIINELYDNFNVQLKQVSDIPRLYRKTNR 509
LE+EN+++L++ ++ ++ + + + ++ + ++ K++ I RL+ K +
Sbjct: 397 LEVENDKILQEVIKFRQKQRAEILAKEHKAAADQKLEKHLIEYKKMLKIKRLFGKDRK 454
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 23.0 bits (47), Expect = 7.8
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 455 ENNELLRKSLQSS-KESLRAVHKRIKEFIINEL 486
EN+ELL K LQ++ +E+ V +I I N +
Sbjct: 212 ENSELLFKELQAAYEETFSLVFTKIDNEIFNRV 244
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.319 0.134 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,776
Number of Sequences: 429
Number of extensions: 6773
Number of successful extensions: 19
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 10
length of query: 645
length of database: 140,377
effective HSP length: 62
effective length of query: 583
effective length of database: 113,779
effective search space: 66333157
effective search space used: 66333157
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 47 (23.0 bits)
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