Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005067-TA|BGIBMGA005067-PA|IPR006578|MADF
(262 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 25 0.91
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 23 2.8
AY569719-1|AAS86672.1| 401|Apis mellifera complementary sex det... 21 8.5
AY569718-1|AAS86671.1| 401|Apis mellifera complementary sex det... 21 8.5
AY569715-1|AAS86668.1| 401|Apis mellifera complementary sex det... 21 8.5
AY569714-1|AAS86667.1| 401|Apis mellifera complementary sex det... 21 8.5
AY569713-1|AAS86666.1| 401|Apis mellifera complementary sex det... 21 8.5
AY569711-1|AAS86664.1| 401|Apis mellifera complementary sex det... 21 8.5
AY569702-1|AAS86655.1| 400|Apis mellifera complementary sex det... 21 8.5
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 8.5
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 24.6 bits (51), Expect = 0.91
Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Query: 90 KVKKKTVWAEIAHAVGNSPESCDKKFRNLKQTYVRLLKRRNRNEIVMIKWPYFEIFE 146
+V TVW +A A + + C Q+Y + N N I W Y + ++
Sbjct: 86 RVLHTTVW--VAGAQRGNEQRCTVTMHGTVQSYDKYDLLENVNNAARINWEYLDKYK 140
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 23.0 bits (47), Expect = 2.8
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 214 RKVALEMRNRQRTVEEKLDKLINIVQESNNIQRERNILFQQ 254
RK +MR R+R E D++ + Q+ Q++++ QQ
Sbjct: 66 RKEMEQMREREREQREHSDRVTSQQQQQQQQQQQQDQQQQQ 106
>AY569719-1|AAS86672.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 232 DKLINIVQESNNIQRERNILFQQFLNSLNQT 262
+++ NI+ ++N I R +L S N+T
Sbjct: 174 EEIKNILNKTNEITEHRTVLAVNIEKSENET 204
>AY569718-1|AAS86671.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 232 DKLINIVQESNNIQRERNILFQQFLNSLNQT 262
+++ NI+ ++N I R +L S N+T
Sbjct: 174 EEIKNILNKTNEITEHRTVLAVNIEKSENET 204
>AY569715-1|AAS86668.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 232 DKLINIVQESNNIQRERNILFQQFLNSLNQT 262
+++ NI+ ++N I R +L S N+T
Sbjct: 174 EEIKNILNKTNEITEHRTVLAVNIEKSENET 204
>AY569714-1|AAS86667.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 232 DKLINIVQESNNIQRERNILFQQFLNSLNQT 262
+++ NI+ ++N I R +L S N+T
Sbjct: 174 EEIKNILNKTNEITEHRTVLAVNIEKSENET 204
>AY569713-1|AAS86666.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 232 DKLINIVQESNNIQRERNILFQQFLNSLNQT 262
+++ NI+ ++N I R +L S N+T
Sbjct: 174 EEIKNILNKTNEITEHRTVLAVNIEKSENET 204
>AY569711-1|AAS86664.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 232 DKLINIVQESNNIQRERNILFQQFLNSLNQT 262
+++ NI+ ++N I R +L S N+T
Sbjct: 174 EEIKNILNKTNEITEHRTVLAVNIEKSENET 204
>AY569702-1|AAS86655.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 232 DKLINIVQESNNIQRERNILFQQFLNSLNQT 262
+++ NI+ ++N I R +L S N+T
Sbjct: 174 EEIKNILNKTNEITEHRTVLAVNIEKSENET 204
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 232 DKLINIVQESNNIQRERNILFQQFLNSLNQT 262
+++ NI+ ++N I R +L S N+T
Sbjct: 174 EEIKNILNKTNEITEHRTVLAVNIEKSENET 204
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.312 0.128 0.353
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,740
Number of Sequences: 429
Number of extensions: 3314
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 10
length of query: 262
length of database: 140,377
effective HSP length: 57
effective length of query: 205
effective length of database: 115,924
effective search space: 23764420
effective search space used: 23764420
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 43 (21.4 bits)
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