GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005058-TA|BGIBMGA005058-PA|IPR001757|ATPase, P-type,
K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter, IPR004014|ATPase, P-type
cation-transporter, N-terminal, IPR008250|E1-E2 ATPase-associated
region, IPR005834|Haloacid dehalogenase-like hydrolase,
IPR006068|ATPase, P-type cation-transporter, C-terminal,
IPR006069|ATPase, P-type cation exchange, alpha subunit,
IPR005775|ATPase, P-type cation exchange, alpha subunit, eukaryotic
         (1118 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    27   0.64 
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    27   0.64 
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    27   0.64 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    25   3.4  

>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 27.5 bits (58), Expect = 0.64
 Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 8/99 (8%)

Query: 243 GESEPQSRGAEFTNENPLETKNLAFFSTNAVEGTAKGIVIC--CGDNTVMGRIA-GLASG 299
           G   P         ENP+  K      T A  G  + IV C  CG N        G  + 
Sbjct: 388 GRKRPMHNVVYRPGENPVTQKREGGPPTGATTGPNE-IVTCTNCGPNPCTHTTTNGCTAE 446

Query: 300 LDTGETP----IAKEIHHFIHLITGVAVFLGVTFFVIAF 334
           L   E P    +AK I     +   VA F+ +TFF I +
Sbjct: 447 LRKKEPPHPIRVAKTIDVIARITFPVAYFMFLTFFFIHY 485


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 27.5 bits (58), Expect = 0.64
 Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 8/99 (8%)

Query: 243 GESEPQSRGAEFTNENPLETKNLAFFSTNAVEGTAKGIVIC--CGDNTVMGRIA-GLASG 299
           G   P         ENP+  K      T A  G  + IV C  CG N        G  + 
Sbjct: 408 GRKRPMHNVVYRPGENPVTQKREGGPPTGATTGPNE-IVTCTNCGPNPCTHTTTNGCTAE 466

Query: 300 LDTGETP----IAKEIHHFIHLITGVAVFLGVTFFVIAF 334
           L   E P    +AK I     +   VA F+ +TFF I +
Sbjct: 467 LRKKEPPHPIRVAKTIDVIARITFPVAYFMFLTFFFIHY 505


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 27.5 bits (58), Expect = 0.64
 Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 8/99 (8%)

Query: 243 GESEPQSRGAEFTNENPLETKNLAFFSTNAVEGTAKGIVIC--CGDNTVMGRIA-GLASG 299
           G   P         ENP+  K      T A  G  + IV C  CG N        G  + 
Sbjct: 357 GRKRPMHNVVYRPGENPVTQKREGGPPTGATTGPNE-IVTCTNCGPNPCTHTTTNGCTAE 415

Query: 300 LDTGETP----IAKEIHHFIHLITGVAVFLGVTFFVIAF 334
           L   E P    +AK I     +   VA F+ +TFF I +
Sbjct: 416 LRKKEPPHPIRVAKTIDVIARITFPVAYFMFLTFFFIHY 454


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 25.0 bits (52), Expect = 3.4
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 786 EEGRLIFDNLKKSIAYTLTSNIPEISPFLAFIL 818
           + G +I D  + S+ +TL  +  EIS  L F+L
Sbjct: 200 KNGSVILDTARCSMKWTLIEHAFEISTMLFFVL 232


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.138    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 296,926
Number of Sequences: 429
Number of extensions: 12202
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 19
Number of HSP's gapped (non-prelim): 7
length of query: 1118
length of database: 140,377
effective HSP length: 65
effective length of query: 1053
effective length of database: 112,492
effective search space: 118454076
effective search space used: 118454076
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)