GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005049-TA|BGIBMGA005049-PA|undefined
         (1243 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   8.8  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 8.8
 Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 7/76 (9%)

Query: 137 QALGDNAPFEVHKMFALLIPGMPDPGNVTRPS----PLNPKPFDITTNPHETGDFSMEDI 192
           QA  D   F   K+  +L+     P     P     PLNP P  +T       DFS    
Sbjct: 184 QAHLDTCDFTRDKVAPILVRARETPNYTACPPTLACPLNPNPQPLTGQQELLQDFSKR-- 241

Query: 193 MQHPNFSTVIDNAKKV 208
              P    V++ AK++
Sbjct: 242 -FSPAIRGVVEFAKRI 256


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.133    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 321,348
Number of Sequences: 429
Number of extensions: 12589
Number of successful extensions: 26
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 26
Number of HSP's gapped (non-prelim): 1
length of query: 1243
length of database: 140,377
effective HSP length: 66
effective length of query: 1177
effective length of database: 112,063
effective search space: 131898151
effective search space used: 131898151
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)