GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005048-TA|BGIBMGA005048-PA|IPR002052|N-6
Adenine-specific DNA methylase, IPR000169|Peptidase, cysteine
peptidase active site, IPR013594|Dynein heavy chain, N-terminal region
1, IPR013602|Dynein heavy chain, N-terminal region 2, IPR011704|ATPase
associated with various cellular activities, AAA-5, IPR004273|Dynein
heavy chain, IPR001464|Annexin
         (4244 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    26   5.7  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    26   5.7  
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    26   7.6  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    26   7.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    26   7.6  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
            phosphatase protein.
          Length = 373

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 10/24 (41%), Positives = 16/24 (66%)

Query: 2572 NLVLFEDAMYHICRINRILEAPRG 2595
            N+ L ED +     ++R+LE+PRG
Sbjct: 123  NIFLPEDCLLFTIELDRVLESPRG 146


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
            precursor protein.
          Length = 388

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 10/24 (41%), Positives = 16/24 (66%)

Query: 2572 NLVLFEDAMYHICRINRILEAPRG 2595
            N+ L ED +     ++R+LE+PRG
Sbjct: 138  NIFLPEDCLLFTIELDRVLESPRG 161


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 25.8 bits (54), Expect = 7.6
 Identities = 10/23 (43%), Positives = 15/23 (65%)

Query: 445 PFVRNNFSPELVMLLREIKYMKY 467
           PF++ N+  E  ++LR  K MKY
Sbjct: 81  PFMQQNYPYEWQLILRRYKIMKY 103


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
            receptor 1 protein.
          Length = 843

 Score = 25.8 bits (54), Expect = 7.6
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 5/32 (15%)

Query: 3547 PYSWLSNNSWGGIVALSKMDAFENLDKDIEGA 3578
            P+ WL+++ WG  + L      E L+++ EGA
Sbjct: 224  PFQWLASDGWGRQIKL-----VEGLEEEAEGA 250


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
            receptor protein.
          Length = 933

 Score = 25.8 bits (54), Expect = 7.6
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 5/32 (15%)

Query: 3547 PYSWLSNNSWGGIVALSKMDAFENLDKDIEGA 3578
            P+ WL+++ WG  + L      E L+++ EGA
Sbjct: 314  PFQWLASDGWGRQIKL-----VEGLEEEAEGA 340


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.137    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,131,029
Number of Sequences: 429
Number of extensions: 47879
Number of successful extensions: 111
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 108
Number of HSP's gapped (non-prelim): 5
length of query: 4244
length of database: 140,377
effective HSP length: 72
effective length of query: 4172
effective length of database: 109,489
effective search space: 456788108
effective search space used: 456788108
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 54 (25.8 bits)