GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005046-TA|BGIBMGA005046-PA|IPR002213|UDP-
glucuronosyl/UDP-glucosyltransferase
         (536 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    28   0.22 
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    24   2.8  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    24   2.8  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        23   4.8  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   6.4  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    23   8.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   8.4  

>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 27.9 bits (59), Expect = 0.22
 Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 9/105 (8%)

Query: 205 KSRIPSQVIVDRVFGHGNNLQKLAKNYSVILSNSHFSINEVRPLVPGLVEVGGLHLDHSQ 264
           ++ I +  I +  F    NL +   N+  I++NS F I  ++    G++E G + L +  
Sbjct: 7   ETNITNSSITETYFVSAYNLNQEDSNW--IITNS-FIIFTMQTGF-GMLESGCVSLKNEV 62

Query: 265 TLPKNMKKLLDASTDGVIYWSFGSMSRIETIPSEKLSGIFEAISE 309
            +   MK ++D    G+ YW+FG      T   +KL+  F  + E
Sbjct: 63  NIM--MKNVVDIVLGGLTYWAFGFAMSFGT---DKLNNPFIGMGE 102


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)

Query: 76  NNLTRKYDSLKPNFIRNLEQI 96
           NN    Y  L  N+I N+EQI
Sbjct: 107 NNYNNNYKKLYKNYIINIEQI 127


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)

Query: 76  NNLTRKYDSLKPNFIRNLEQI 96
           NN    Y  L  N+I N+EQI
Sbjct: 107 NNYNNNYKKLYKNYIINIEQI 127


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 53  FPVDAPQPNINQISLAGTIPEITNNLTRKYDSLKPNFIRNL 93
           FP     PN N ++  G +P++  NLT+     + + I  +
Sbjct: 92  FPALLKDPNGNVVARNGGVPQL-GNLTKHLQVFRDHLINQI 131


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 326 NITVPDNVYTMDWIPQYATLCHPNVKL 352
           N+T PD+     +   Y  +C P +K+
Sbjct: 410 NLTTPDDPDIQIFFAGYQAICKPKLKI 436


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query: 151 LSSVPLPWVNDYLGNPETASYI 172
           L S+PLP  +D L  P + +Y+
Sbjct: 475 LPSLPLPGADDDLFGPASPAYV 496


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 10/28 (35%), Positives = 12/28 (42%)

Query: 153 SVPLPWVNDYLGNPETASYIPSYMMGYG 180
           SV L W   Y GN     Y+  Y +  G
Sbjct: 891 SVQLSWAAPYDGNSPIKRYVIEYKISKG 918


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.137    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,413
Number of Sequences: 429
Number of extensions: 6450
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 8
length of query: 536
length of database: 140,377
effective HSP length: 61
effective length of query: 475
effective length of database: 114,208
effective search space: 54248800
effective search space used: 54248800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 46 (22.6 bits)