Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005045-TA|BGIBMGA005045-PA|IPR009057|Homeodomain-like,
IPR001356|Homeobox
(210 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee homeobox-... 34 0.001
M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 30 0.014
M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee homeobox-... 28 0.056
M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee homeobox-... 28 0.056
M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee homeobox-... 28 0.075
M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee homeobox-... 28 0.075
M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee homeobox-... 28 0.075
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 28 0.075
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 27 0.13
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 27 0.13
AB248729-1|BAF02606.1| 43|Apis mellifera distal-less protein. 27 0.17
>M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H17. ).
Length = 79
Score = 33.9 bits (74), Expect = 0.001
Identities = 18/69 (26%), Positives = 25/69 (36%)
Query: 57 RSRRSGRHARVPFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDDRIKIWFQNRRAR 116
R + R R PFT + ++KIWFQNRRA+
Sbjct: 4 RKHKPNRKPRTPFTTQQLLSLEKKFREKQYLTIAERAEFSSSLHLTETQVKIWFQNRRAK 63
Query: 117 ERREKCANI 125
+R + A I
Sbjct: 64 AKRLQEAEI 72
>M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H40. ).
Length = 74
Score = 30.3 bits (65), Expect = 0.014
Identities = 15/62 (24%), Positives = 22/62 (35%)
Query: 59 RRSGRHARVPFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDDRIKIWFQNRRARER 118
RR R AR FT + ++KIWFQNRR + +
Sbjct: 5 RREARRARTAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWK 64
Query: 119 RE 120
++
Sbjct: 65 KQ 66
>M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E30. ).
Length = 109
Score = 28.3 bits (60), Expect = 0.056
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 2/29 (6%)
Query: 105 RIKIWFQNRRARERREKCANIRPPVAVTL 133
+IKIWFQN+RA+ + K + + P+A+ L
Sbjct: 63 QIKIWFQNKRAKIK--KASGQKNPLALQL 89
>M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E60. ).
Length = 109
Score = 28.3 bits (60), Expect = 0.056
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 2/29 (6%)
Query: 105 RIKIWFQNRRARERREKCANIRPPVAVTL 133
+IKIWFQN+RA+ + K + + P+A+ L
Sbjct: 63 QIKIWFQNKRAKIK--KASGQKNPLALQL 89
>M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H15. ).
Length = 74
Score = 27.9 bits (59), Expect = 0.075
Identities = 10/16 (62%), Positives = 14/16 (87%)
Query: 105 RIKIWFQNRRARERRE 120
+IKIWFQNRR + ++E
Sbjct: 51 QIKIWFQNRRMKLKKE 66
>M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H90. ).
Length = 74
Score = 27.9 bits (59), Expect = 0.075
Identities = 10/16 (62%), Positives = 14/16 (87%)
Query: 105 RIKIWFQNRRARERRE 120
+IKIWFQNRR + ++E
Sbjct: 51 QIKIWFQNRRMKWKKE 66
>M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H55. ).
Length = 86
Score = 27.9 bits (59), Expect = 0.075
Identities = 10/16 (62%), Positives = 14/16 (87%)
Query: 105 RIKIWFQNRRARERRE 120
+IKIWFQNRR + ++E
Sbjct: 51 QIKIWFQNRRMKWKKE 66
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 27.9 bits (59), Expect = 0.075
Identities = 10/16 (62%), Positives = 14/16 (87%)
Query: 105 RIKIWFQNRRARERRE 120
+IKIWFQNRR + ++E
Sbjct: 313 QIKIWFQNRRMKWKKE 328
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 27.1 bits (57), Expect = 0.13
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 2 DPSSAQSTSKCNSDFSIERILSDDSK 27
D S +STS +SD IERIL + +
Sbjct: 191 DQSEVESTSSLHSDMPIERILEAEKR 216
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 27.1 bits (57), Expect = 0.13
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 2 DPSSAQSTSKCNSDFSIERILSDDSK 27
D S +STS +SD IERIL + +
Sbjct: 191 DQSEVESTSSLHSDMPIERILEAEKR 216
>AB248729-1|BAF02606.1| 43|Apis mellifera distal-less protein.
Length = 43
Score = 26.6 bits (56), Expect = 0.17
Identities = 8/15 (53%), Positives = 14/15 (93%)
Query: 105 RIKIWFQNRRARERR 119
++KIWFQNRR++ ++
Sbjct: 24 QVKIWFQNRRSKYKK 38
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.316 0.129 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,025
Number of Sequences: 429
Number of extensions: 2235
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 11
length of query: 210
length of database: 140,377
effective HSP length: 55
effective length of query: 155
effective length of database: 116,782
effective search space: 18101210
effective search space used: 18101210
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 42 (21.0 bits)
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