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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005035-TA|BGIBMGA005035-PA|IPR008709|Neurochondrin
         (737 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex det...    24   5.1  
DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex det...    24   5.1  
DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex det...    24   5.1  
DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex det...    24   5.1  
AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex det...    24   5.1  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    24   5.1  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    24   5.1  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    24   5.1  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    24   5.1  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    24   5.1  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    23   6.8  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    23   6.8  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    23   6.8  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    23   6.8  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    23   6.8  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    23   6.8  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    23   6.8  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    23   6.8  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    23   6.8  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    23   6.8  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    23   6.8  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    23   6.8  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    23   6.8  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    23   6.8  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    23   6.8  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    23   8.9  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    23   8.9  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    23   8.9  

>DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 493 YKKPPIPKSERGKARTQPEPELDPKLLEDMKDS 525
           Y+K      ER + RT+ E   +PK++  + ++
Sbjct: 56  YRKYGETSKERSRNRTEREKSKEPKIISSLSNN 88


>DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 493 YKKPPIPKSERGKARTQPEPELDPKLLEDMKDS 525
           Y+K      ER + RT+ E   +PK++  + ++
Sbjct: 56  YRKYGETSKERSRNRTEREKSKEPKIISSLSNN 88


>DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 493 YKKPPIPKSERGKARTQPEPELDPKLLEDMKDS 525
           Y+K      ER + RT+ E   +PK++  + ++
Sbjct: 56  YRKYGETSKERSRNRTEREKSKEPKIISSLSNN 88


>DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 493 YKKPPIPKSERGKARTQPEPELDPKLLEDMKDS 525
           Y+K      ER + RT+ E   +PK++  + ++
Sbjct: 56  YRKYGETSKERSRNRTEREKSKEPKIISSLSNN 88


>AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 493 YKKPPIPKSERGKARTQPEPELDPKLLEDMKDS 525
           Y+K      ER + RT+ E   +PK++  + ++
Sbjct: 289 YRKYGETSKERSRNRTEREKSKEPKIISSLSNN 321


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 493 YKKPPIPKSERGKARTQPEPELDPKLLEDMKDS 525
           Y+K      ER + RT+ E   +PK++  + ++
Sbjct: 289 YRKYGETSKERSRNRTEREKSKEPKIISSLSNN 321


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 493 YKKPPIPKSERGKARTQPEPELDPKLLEDMKDS 525
           Y+K      ER + RT+ E   +PK++  + ++
Sbjct: 289 YRKYGETSKERSRNRTEREKSKEPKIISSLSNN 321


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 493 YKKPPIPKSERGKARTQPEPELDPKLLEDMKDS 525
           Y+K      ER + RT+ E   +PK++  + ++
Sbjct: 289 YRKYGETSKERSRNRTEREKSKEPKIISSLSNN 321


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 493 YKKPPIPKSERGKARTQPEPELDPKLLEDMKDS 525
           Y+K      ER + RT+ E   +PK++  + ++
Sbjct: 289 YRKYGETSKERSRNRTEREKSKEPKIISSLSNN 321


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 493 YKKPPIPKSERGKARTQPEPELDPKLLEDMKDS 525
           Y+K      ER + RT+ E   +PK++  + ++
Sbjct: 278 YRKYGETSKERSRNRTEREKSKEPKIISSLSNN 310


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 493 YKKPPIPKSERGKARTQPEPELDPKLLEDMKDS 525
           Y+K      ER + RT+ E   +PK++  + ++
Sbjct: 56  YRKYRETSKERSQDRTERETSKEPKIISSLSNN 88


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 493 YKKPPIPKSERGKARTQPEPELDPKLLEDMKDS 525
           Y+K      ER + RT+ E   +PK++  + ++
Sbjct: 56  YRKYRETSKERSQDRTERETSKEPKIISSLSNN 88


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 493 YKKPPIPKSERGKARTQPEPELDPKLLEDMKDS 525
           Y+K      ER + RT+ E   +PK++  + ++
Sbjct: 56  YRKYRKTSKERSRDRTERERSKEPKIISSLSNN 88


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 493 YKKPPIPKSERGKARTQPEPELDPKLLEDMKDS 525
           Y+K      ER + RT+ E   +PK++  + ++
Sbjct: 56  YRKYRKTSKERSRDRTERERSKEPKIISSLSNN 88


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 493 YKKPPIPKSERGKARTQPEPELDPKLLEDMKDS 525
           Y+K      ER + RT+ E   +PK++  + ++
Sbjct: 56  YRKYRKTSKERSRDRTERERSKEPKIISSLSNN 88


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 493 YKKPPIPKSERGKARTQPEPELDPKLLEDMKDS 525
           Y+K      ER + RT+ E   +PK++  + ++
Sbjct: 56  YRKYRKTSKERSRDRTERERSKEPKIISSLSNN 88


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 493 YKKPPIPKSERGKARTQPEPELDPKLLEDMKDS 525
           Y+K      ER + RT+ E   +PK++  + ++
Sbjct: 56  YRKYRKTSKERSRDRTERERSKEPKIISSLSNN 88


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 493 YKKPPIPKSERGKARTQPEPELDPKLLEDMKDS 525
           Y+K      ER + RT+ E   +PK++  + ++
Sbjct: 56  YRKYRKTSKERSRDRTERERSKEPKIISSLSNN 88


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 493 YKKPPIPKSERGKARTQPEPELDPKLLEDMKDS 525
           Y+K      ER + RT+ E   +PK++  + ++
Sbjct: 56  YRKYRETSKERSRDRTERERSREPKIISSLSNN 88


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 493 YKKPPIPKSERGKARTQPEPELDPKLLEDMKDS 525
           Y+K      ER + RT+ E   +PK++  + ++
Sbjct: 55  YRKYRETSKERSRDRTERERSREPKIISSLSNN 87


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 493 YKKPPIPKSERGKARTQPEPELDPKLLEDMKDS 525
           Y+K      ER + RT+ E   +PK++  + ++
Sbjct: 56  YRKYRETSKERSRDRTERERSREPKIISSLSNN 88


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 493 YKKPPIPKSERGKARTQPEPELDPKLLEDMKDS 525
           Y+K      ER + RT+ E   +PK++  + ++
Sbjct: 56  YRKYRETSKERSRDRTERERSREPKIISSLSNN 88


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 493 YKKPPIPKSERGKARTQPEPELDPKLLEDMKDS 525
           Y+K      ER + RT+ E   +PK++  + ++
Sbjct: 56  YRKYRETSKERSRDRTERERSREPKIISSLSNN 88


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 493 YKKPPIPKSERGKARTQPEPELDPKLLEDMKDS 525
           Y+K      ER + RT+ E   +PK++  + ++
Sbjct: 56  YRKYRETSKERSRDRTERERSREPKIISSLSNN 88


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 493 YKKPPIPKSERGKARTQPEPELDPKLLEDMKDS 525
           Y+K      ER + RT+ E   +PK++  + ++
Sbjct: 289 YRKYGETSKERSRDRTERERSKEPKIISSLSNN 321


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 9/32 (28%), Positives = 17/32 (53%)

Query: 493 YKKPPIPKSERGKARTQPEPELDPKLLEDMKD 524
           Y+K      ER + RT+ E   +PK++  + +
Sbjct: 56  YRKYRETSKERSRDRTERERSREPKIISSLSN 87


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 9/32 (28%), Positives = 17/32 (53%)

Query: 493 YKKPPIPKSERGKARTQPEPELDPKLLEDMKD 524
           Y+K      ER + RT+ E   +PK++  + +
Sbjct: 56  YRKYRETSKERSRDRTERERSREPKIISSLSN 87


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 9/32 (28%), Positives = 17/32 (53%)

Query: 493 YKKPPIPKSERGKARTQPEPELDPKLLEDMKD 524
           Y+K      ER + RT+ E   +PK++  + +
Sbjct: 289 YRKYRETSKERSRDRTERERSREPKIISSLSN 320


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.134    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,563
Number of Sequences: 429
Number of extensions: 7666
Number of successful extensions: 87
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59
Number of HSP's gapped (non-prelim): 28
length of query: 737
length of database: 140,377
effective HSP length: 63
effective length of query: 674
effective length of database: 113,350
effective search space: 76397900
effective search space used: 76397900
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 47 (23.0 bits)

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