GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005033-TA|BGIBMGA005033-PA|undefined
         (336 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   5.0  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    22   6.6  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    22   6.6  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    22   6.6  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    22   6.6  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    22   6.6  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    22   6.6  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    22   6.6  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   8.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   8.7  

>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 11/47 (23%), Positives = 18/47 (38%)

Query: 6   RIRCVAGYDGGLPQFFILEALDPITGKTRLNSSVNETDGLAMFKLDL 52
           R+R    Y G      +LE + P    T     +   D   ++K D+
Sbjct: 362 RVRVGTRYPGRADHMIMLEMILPGVAVTYYGEEIGMVDNTTIYKYDV 408


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/28 (28%), Positives = 16/28 (57%)

Query: 241 SRQDDVLNQNLPQPIGSNNFRANYGTNS 268
           SR+  +++      I +NN++ NY  N+
Sbjct: 75  SREPKIISSLSNNTIHNNNYKYNYNNNN 102


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/28 (28%), Positives = 16/28 (57%)

Query: 241 SRQDDVLNQNLPQPIGSNNFRANYGTNS 268
           SR+  +++      I +NN++ NY  N+
Sbjct: 75  SREPKIISSLSNNTIHNNNYKYNYNNNN 102


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/28 (28%), Positives = 16/28 (57%)

Query: 241 SRQDDVLNQNLPQPIGSNNFRANYGTNS 268
           SR+  +++      I +NN++ NY  N+
Sbjct: 76  SREPKIISSLSNNTIHNNNYKYNYNNNN 103


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/28 (28%), Positives = 16/28 (57%)

Query: 241 SRQDDVLNQNLPQPIGSNNFRANYGTNS 268
           SR+  +++      I +NN++ NY  N+
Sbjct: 76  SREPKIISSLSNNTIHNNNYKYNYNNNN 103


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/28 (28%), Positives = 16/28 (57%)

Query: 241 SRQDDVLNQNLPQPIGSNNFRANYGTNS 268
           SR+  +++      I +NN++ NY  N+
Sbjct: 76  SREPKIISSLSNNTIHNNNYKYNYNNNN 103


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/28 (28%), Positives = 16/28 (57%)

Query: 241 SRQDDVLNQNLPQPIGSNNFRANYGTNS 268
           SR+  +++      I +NN++ NY  N+
Sbjct: 76  SREPKIISSLSNNTIHNNNYKYNYNNNN 103


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)

Query: 188 VPKLDDADEWPSIKEVRGEWT 208
           +PKL + D+W S+ E+    T
Sbjct: 76  LPKLMEFDDWTSVMELHSWMT 96


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)

Query: 47  MFKLDLSQLTSTGEGDSATFN 67
           M+KLDL  +  T   D +++N
Sbjct: 675 MYKLDLKNMKYTRSADLSSYN 695


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 163 IKPSPDSKTPDPQPDILNAPDADGQ 187
           ++P  DS TP  QP  L+A   + Q
Sbjct: 499 VQPHQDSATPADQPLDLSAKPKNSQ 523


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.313    0.133    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,681
Number of Sequences: 429
Number of extensions: 4391
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 336
length of database: 140,377
effective HSP length: 58
effective length of query: 278
effective length of database: 115,495
effective search space: 32107610
effective search space used: 32107610
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 44 (21.8 bits)