Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005032-TA|BGIBMGA005032-PA|IPR013151|Immunoglobulin,
IPR007110|Immunoglobulin-like
(184 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 46 2e-07
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 46 2e-07
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 40 1e-05
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 39 3e-05
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 21 9.5
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 9.5
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 46.4 bits (105), Expect = 2e-07
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 7/133 (5%)
Query: 27 IVSTKSLVLQKVTRDLGGDYSCRATNALGETASQTTHLSIQYAPVCSHPTPQVLGAQIEE 86
I+S +L+LQ V D G Y C+A+N +G + L + +P + P+ +++ + +
Sbjct: 765 ILSNGTLLLQHVKEDREGFYLCQASNGIGSGIGKVVQLKVNSSPYFAAPS-RLVTVKKGD 823
Query: 87 ALRVRCSVTANPPDVTFFWQFN-----NSGESLDVSPLKFGTANGSTSELVYKPQSERDF 141
+ C V + P VT W N + V+ + T +G ++L D
Sbjct: 824 TATLHCEVHGDTP-VTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIAQLQISSAEASDS 882
Query: 142 GTLSCRGANTVGR 154
G C+ +N GR
Sbjct: 883 GAYFCQASNLYGR 895
Score = 36.3 bits (80), Expect = 2e-04
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 33 LVLQKVTRDLGGDYSCRATNALGETASQTTHLSIQYAPVCSHPTPQVLGAQIEEALRVRC 92
L L+ VT + G Y C A+N GE +++ I AP+ TP +L + RC
Sbjct: 295 LALEAVTLEDNGIYRCSASNPGGEASAEIR--LIVTAPLHVEVTPPLLSVHLGGNAEFRC 352
Query: 93 SVTANPPDVTFFWQFNNSGESL 114
V+ +P F + G L
Sbjct: 353 EVSTHPQAGPHFITWYKDGRQL 374
Score = 30.7 bits (66), Expect = 0.009
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 13/78 (16%)
Query: 33 LVLQKVTRDLGGDYSCRATNALGETASQTTHLSIQYAPVCSHPTPQVLGAQIEEALR--- 89
L L + R+ G Y C + G+TA + L + AP P +L + IE+ L+
Sbjct: 384 LRLNGINREDRGMYQCIVRRSEGDTAQASAELQLGNAP------PMLLYSFIEQTLQPGP 437
Query: 90 ---VRCSVTANP-PDVTF 103
++CS NP P VT+
Sbjct: 438 AVSLKCSAAGNPTPQVTW 455
Score = 30.3 bits (65), Expect = 0.012
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 10/112 (8%)
Query: 43 GGDYSCRATNALGETASQTTHLSIQYAPVCSHPTPQVLGAQIEEALRVRCSVTANPPDVT 102
GG+YSC A N G+ + L++ P P+V A E LR++C V P +
Sbjct: 494 GGEYSCMAENRAGK-VTHAARLNVYGLPYI-RLIPKVT-AVAGETLRLKCPVAGYPIEEI 550
Query: 103 FFWQFNNS-GESLDVSPLKFGTANGSTSELVYKPQSERDFGTLSCRGANTVG 153
+ + N + L L GT ++ Q + D G +C N G
Sbjct: 551 KWERANRELPDDLRQKVLPDGTL------VITSVQKKGDAGVYTCSARNKQG 596
Score = 30.3 bits (65), Expect = 0.012
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 18/106 (16%)
Query: 27 IVSTKSLVLQKVTRDLGGDYSCRATNALGETASQTTHLSIQYAPVCSHPTPQVLGAQIEE 86
I+ + L+L + GGDY+C+ NA G T L++Q P S P
Sbjct: 1363 ILPSGELMLSNLQSQDGGDYTCQVENAQGNDKLHYT-LTVQVPP--SAP----------- 1408
Query: 87 ALRVRCSVTANPPDVTFFWQF-NNSGESLDVSPLKFGTANGSTSEL 131
L V S +++ + W+ +N G SL L + TA+G+ EL
Sbjct: 1409 VLYVTSSTSSS---ILLHWKSGHNGGASLTGYTLHYRTAHGNLDEL 1451
Score = 24.6 bits (51), Expect = 0.58
Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 3/122 (2%)
Query: 33 LVLQKVTRDLGGDYSCRATNALGETASQTTHLSIQYAP-VCSHPTPQVLGAQIEEALRVR 91
L + + + GDY+C A N E T L ++ P PT + AL +
Sbjct: 674 LSITNLAAEHSGDYTCVAANPAAE-VRYTAKLQVKVPPRWIVEPTDVSVERNKHVALHCQ 732
Query: 92 CSVTANPPDVTFFWQFNNSGESLDVSPLKFGTANGSTSELVYKPQSERDFGTLSCRGANT 151
P V + SGE ++ + + + L+ + +R+ G C+ +N
Sbjct: 733 AQGVPTPTIVWKKATGSKSGEYEELRERAYTKILSNGTLLLQHVKEDRE-GFYLCQASNG 791
Query: 152 VG 153
+G
Sbjct: 792 IG 793
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 46.4 bits (105), Expect = 2e-07
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 7/133 (5%)
Query: 27 IVSTKSLVLQKVTRDLGGDYSCRATNALGETASQTTHLSIQYAPVCSHPTPQVLGAQIEE 86
I+S +L+LQ V D G Y C+A+N +G + L + +P + P+ +++ + +
Sbjct: 761 ILSNGTLLLQHVKEDREGFYLCQASNGIGSGIGKVVQLKVNSSPYFAAPS-RLVTVKKGD 819
Query: 87 ALRVRCSVTANPPDVTFFWQFN-----NSGESLDVSPLKFGTANGSTSELVYKPQSERDF 141
+ C V + P VT W N + V+ + T +G ++L D
Sbjct: 820 TATLHCEVHGDTP-VTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIAQLQISSAEASDS 878
Query: 142 GTLSCRGANTVGR 154
G C+ +N GR
Sbjct: 879 GAYFCQASNLYGR 891
Score = 36.3 bits (80), Expect = 2e-04
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 33 LVLQKVTRDLGGDYSCRATNALGETASQTTHLSIQYAPVCSHPTPQVLGAQIEEALRVRC 92
L L+ VT + G Y C A+N GE +++ I AP+ TP +L + RC
Sbjct: 295 LALEAVTLEDNGIYRCSASNPGGEASAEIR--LIVTAPLHVEVTPPLLSVHLGGNAEFRC 352
Query: 93 SVTANPPDVTFFWQFNNSGESL 114
V+ +P F + G L
Sbjct: 353 EVSTHPQAGPHFITWYKDGRQL 374
Score = 30.7 bits (66), Expect = 0.009
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 13/78 (16%)
Query: 33 LVLQKVTRDLGGDYSCRATNALGETASQTTHLSIQYAPVCSHPTPQVLGAQIEEALR--- 89
L L + R+ G Y C + G+TA + L + AP P +L + IE+ L+
Sbjct: 384 LRLNGINREDRGMYQCIVRRSEGDTAQASAELQLGNAP------PMLLYSFIEQTLQPGP 437
Query: 90 ---VRCSVTANP-PDVTF 103
++CS NP P VT+
Sbjct: 438 AVSLKCSAAGNPTPQVTW 455
Score = 30.3 bits (65), Expect = 0.012
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 10/112 (8%)
Query: 43 GGDYSCRATNALGETASQTTHLSIQYAPVCSHPTPQVLGAQIEEALRVRCSVTANPPDVT 102
GG+YSC A N G+ + L++ P P+V A E LR++C V P +
Sbjct: 494 GGEYSCMAENRAGK-VTHAARLNVYGLPYI-RLIPKVT-AVAGETLRLKCPVAGYPIEEI 550
Query: 103 FFWQFNNS-GESLDVSPLKFGTANGSTSELVYKPQSERDFGTLSCRGANTVG 153
+ + N + L L GT ++ Q + D G +C N G
Sbjct: 551 KWERANRELPDDLRQKVLPDGTL------VITSVQKKGDAGVYTCSARNKQG 596
Score = 30.3 bits (65), Expect = 0.012
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 18/106 (16%)
Query: 27 IVSTKSLVLQKVTRDLGGDYSCRATNALGETASQTTHLSIQYAPVCSHPTPQVLGAQIEE 86
I+ + L+L + GGDY+C+ NA G T L++Q P S P
Sbjct: 1359 ILPSGELMLSNLQSQDGGDYTCQVENAQGNDKLHYT-LTVQVPP--SAP----------- 1404
Query: 87 ALRVRCSVTANPPDVTFFWQF-NNSGESLDVSPLKFGTANGSTSEL 131
L V S +++ + W+ +N G SL L + TA+G+ EL
Sbjct: 1405 VLYVTSSTSSS---ILLHWKSGHNGGASLTGYTLHYRTAHGNLDEL 1447
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 40.3 bits (90), Expect = 1e-05
Identities = 43/146 (29%), Positives = 61/146 (41%), Gaps = 9/146 (6%)
Query: 33 LVLQKVTRDLGGDYSCRATNALGETASQTTHLSIQYAP-VCSHPTPQVLGAQIEEALRVR 91
L++ +T G+Y C A NA G TAS +T L++ P PT + AQ +A RV
Sbjct: 643 LMISVITARHAGEYVCTAENAAG-TASHSTTLTVNVPPRWILEPTDKAF-AQGSDA-RVE 699
Query: 92 CSVTANP-PDVTFFWQFNNSGESLDVSPLKFGTANGSTSE--LVYKPQSERDFGTLSCRG 148
C P P VT W+ D + LK + S + L + + G C
Sbjct: 700 CKADGFPKPQVT--WKKAAGDTPGDYTDLKLSNPDISVEDGTLSINNIQKTNEGYYLCEA 757
Query: 149 ANTVGRQLEPCDFQIVPAGKFTEIEI 174
N +G L F V A EI++
Sbjct: 758 VNGIGAGLSAVIFISVQAPPHFEIKL 783
Score = 33.9 bits (74), Expect = 0.001
Identities = 32/134 (23%), Positives = 50/134 (37%), Gaps = 10/134 (7%)
Query: 26 VIVSTKSLVLQKVTRDLGGDYSCRATNALGETASQTTHLSIQYAPVCSHPTPQVLGAQIE 85
+ V +L + + + G Y C A N +G S +S+Q P + E
Sbjct: 733 ISVEDGTLSINNIQKTNEGYYLCEAVNGIGAGLSAVIFISVQAPPHFEIKLKNQTARRGE 792
Query: 86 EALRVRCSVTANPPDVTFFWQFNNSGESLD-VSPLKFG-----TANGSTSELVYKPQSER 139
A+ ++C P + W NN + LD S ++ ANG S+L K
Sbjct: 793 PAV-LQCEAQGEKP-IGILWNMNN--KRLDPKSDSRYTIREEILANGVLSDLSIKRTERS 848
Query: 140 DFGTLSCRGANTVG 153
D +C N G
Sbjct: 849 DSALFTCVATNAFG 862
Score = 30.3 bits (65), Expect = 0.012
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Query: 32 SLVLQKVTRDLGGDYSCRATNALGETASQTTHLSIQYAPVCSHPTPQVLGAQIEEALRVR 91
SL +++V R G+YSC N G TH I +AP S ++VR
Sbjct: 1330 SLFIKEVDRTDAGEYSCYVENTFGH--DTVTHQLIVHAPPHSPQITLTATTTNSLTMKVR 1387
Query: 92 CSVTANPP 99
T N P
Sbjct: 1388 PHPTDNAP 1395
Score = 26.6 bits (56), Expect = 0.14
Identities = 31/143 (21%), Positives = 50/143 (34%), Gaps = 4/143 (2%)
Query: 13 ELDKQVLHNVVSGVIVSTKSLVLQKVTRDLG-GDYSCRATNALGETASQTTHLSIQYAPV 71
E D +VL + +L+++ V R Y+C A NA G +A T + + P
Sbjct: 525 ERDTRVLPINRKQKVFPNGTLIIENVERMSDQATYTCVARNAQGYSARGTLEVQVMVPPT 584
Query: 72 CSHPTPQVLGAQIEEALRVRCSVTANPPDVTFFWQFNNSGESL-DVSPLKFGTANGSTSE 130
+ L E ++C V + W + GE + S + S
Sbjct: 585 IQQFSFTKLPMNAGEFANLQCIVPTGDLPLNIRWSY--PGEEMGGSSGVLAKKVADRVSM 642
Query: 131 LVYKPQSERDFGTLSCRGANTVG 153
L+ + R G C N G
Sbjct: 643 LMISVITARHAGEYVCTAENAAG 665
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 38.7 bits (86), Expect = 3e-05
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 9/123 (7%)
Query: 32 SLVLQKVTRDLGGDYSCRATNALGETASQTTHLSIQYAPVCSHPTPQVLGAQIEEALRVR 91
SL L KV G+Y+C A + QT L+I P TP+ +++E +R
Sbjct: 366 SLYLTKVQLIHAGNYTCHAVR--NQDVVQTHVLTIHTIPEVK-VTPRFQAKRLKEEANIR 422
Query: 92 CSVTANP-PDVTFFWQFNNSGESLDVSPLKFGTANGSTSELVYKPQSERDFGTLSCRGAN 150
C V P P V W N+ + D P K+ G+ ++L+ K D G C+ A+
Sbjct: 423 CHVAGEPLPRVQ--WLKNDEALNHD-QPDKYDLI-GNGTKLIIKNVDYADTGAYMCQ-AS 477
Query: 151 TVG 153
++G
Sbjct: 478 SIG 480
Score = 23.4 bits (48), Expect = 1.3
Identities = 8/31 (25%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 80 LGAQIEEALRVRCSVTANPPDVTFFWQFNNS 110
+ A++ + + ++C VT PP W+ N +
Sbjct: 320 ISARVGDNVEIKCDVTGTPPP-PLVWRRNGA 349
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 118 PLKFGTANGSTSELVYKPQSER 139
PL+FG+ + +++YK S R
Sbjct: 145 PLQFGSFGYTKRDVIYKWNSAR 166
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/28 (28%), Positives = 18/28 (64%)
Query: 100 DVTFFWQFNNSGESLDVSPLKFGTANGS 127
D+T Q +++G+S++ SP++ G+
Sbjct: 20 DLTQCLQESSTGQSVEFSPMELNALVGT 47
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.317 0.132 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,497
Number of Sequences: 429
Number of extensions: 2182
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of query: 184
length of database: 140,377
effective HSP length: 54
effective length of query: 130
effective length of database: 117,211
effective search space: 15237430
effective search space used: 15237430
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 41 (20.6 bits)
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