GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005019-TA|BGIBMGA005019-PA|IPR006621|Nose resistant to
fluoxetine-4, N-terminal
         (450 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    25   1.7  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   6.9  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   6.9  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                23   6.9  

>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
          protein MRJP6 protein.
          Length = 437

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 8/46 (17%)

Query: 6  LVVCLYILAEVTCQVTNQVKNSKNLTQG--------YVDYNAASKD 43
          L+VCL I  +      +Q K+SKNL           Y+DY+  S +
Sbjct: 7  LIVCLSIACQDVTSAIHQRKSSKNLEHSMNVIHEWKYIDYDFGSDE 52


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 8/11 (72%), Positives = 11/11 (100%)

Query: 140 LMKYCLVDIIL 150
           LM+YCLV+I+L
Sbjct: 322 LMEYCLVNIVL 332


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 8/19 (42%), Positives = 14/19 (73%)

Query: 360 LEIELCRKNWWLNLLMINN 378
           +EI++C + W L+  +INN
Sbjct: 125 IEIDMCDRLWVLDSGLINN 143


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 8/25 (32%), Positives = 17/25 (68%)

Query: 404 VFWFSIYKKYPKAGLIAASVMFMIA 428
           V W  +++K P AGL + +++++ A
Sbjct: 243 VAWQMLFRKLPFAGLHSHTIIYLSA 267


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.325    0.139    0.443 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,322
Number of Sequences: 429
Number of extensions: 5727
Number of successful extensions: 63
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59
Number of HSP's gapped (non-prelim): 4
length of query: 450
length of database: 140,377
effective HSP length: 60
effective length of query: 390
effective length of database: 114,637
effective search space: 44708430
effective search space used: 44708430
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 45 (22.2 bits)