GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005014-TA|BGIBMGA005014-PA|undefined
         (2053 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1240|AAF58691.1|  131|Drosophila melanogaster CG9077-PA...    35   1.4  
AY069534-1|AAL39679.1|  836|Drosophila melanogaster LD25543p pro...    33   5.6  
AE014297-4168|AAF56740.1|  836|Drosophila melanogaster CG12876-P...    33   5.6  
AY118705-1|AAM50565.1|  853|Drosophila melanogaster AT21921p pro...    32   9.8  

>AE013599-1240|AAF58691.1|  131|Drosophila melanogaster CG9077-PA
            protein.
          Length = 131

 Score = 34.7 bits (76), Expect = 1.4
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 14/79 (17%)

Query: 967  YVLVAVLSCGNFLP-QPNEEPVLLLETQVPSTSIPYTNGVKFSITLDGENVRVAVTRLLI 1025
            +VL  +++CG  LP  P  EPV +L++++  T   YT+     +  DG          + 
Sbjct: 8    FVLAVMVACGQALPVDPEREPVAILKSEIIKTEEGYTSAY---VGADG----------IS 54

Query: 1026 RVQERMLADKSDDTRGLEL 1044
            R +E  L DK  D   LE+
Sbjct: 55   RNEEAFLVDKGTDEEALEV 73


>AY069534-1|AAL39679.1|  836|Drosophila melanogaster LD25543p protein.
          Length = 836

 Score = 32.7 bits (71), Expect = 5.6
 Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 2/109 (1%)

Query: 1198 APLIAKQDWEVARTLWPAILKAPLSEKPS-ILKLEQAFGDTIHRNFPAVNTRLVIPQSAI 1256
            A ++     E  R+LW       ++ K +    L Q +   + R    +   +   ++AI
Sbjct: 224  ADVLRAMQKESVRSLWEKEWIPTIAGKQAGFHALTQLYQSLVCRAAKKIGEEIARLRNAI 283

Query: 1257 DAAARLLTEEQLNDAEFVEMLKKAKQNETAFSDRNERLYNELILELVDL 1305
            D      T    N+    E   +AK+N T  +  NE +YNE+I EL  L
Sbjct: 284  DLFKAAQTRSG-NETYLDEYFSRAKRNLTESTKDNEFIYNEIIPELSTL 331


>AE014297-4168|AAF56740.1|  836|Drosophila melanogaster CG12876-PA
            protein.
          Length = 836

 Score = 32.7 bits (71), Expect = 5.6
 Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 2/109 (1%)

Query: 1198 APLIAKQDWEVARTLWPAILKAPLSEKPS-ILKLEQAFGDTIHRNFPAVNTRLVIPQSAI 1256
            A ++     E  R+LW       ++ K +    L Q +   + R    +   +   ++AI
Sbjct: 224  ADVLRAMQKESVRSLWEKEWIPTIAGKQAGFHALTQLYQSLVCRAAKKIGEEIARLRNAI 283

Query: 1257 DAAARLLTEEQLNDAEFVEMLKKAKQNETAFSDRNERLYNELILELVDL 1305
            D      T    N+    E   +AK+N T  +  NE +YNE+I EL  L
Sbjct: 284  DLFKAAQTRSG-NETYLDEYFSRAKRNLTESTKDNEFIYNEIIPELSTL 331


>AY118705-1|AAM50565.1|  853|Drosophila melanogaster AT21921p protein.
          Length = 853

 Score = 31.9 bits (69), Expect = 9.8
 Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 3/82 (3%)

Query: 1947 LPDEQRTLRLLIRSARSKQLVERHFGVLGMCAYLSSRPYSIGSKFGDVLSELSRHTNAPD 2006
            LP+  R   LL+R A      E++   +GMC  +   P  +   F      ++   N P 
Sbjct: 751  LPEFLRQWCLLLRYAYDHD--EKYLSFMGMCLMIRENPGGVVPDFLFFCDAIASWDNPPQ 808

Query: 2007 PVPATIRRALADFR-RTHQDDW 2027
             +   IRR +  F+ +T  ++W
Sbjct: 809  DLRQMIRRIIEGFKNQTGAENW 830


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.322    0.136    0.415 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,683,048
Number of Sequences: 52641
Number of extensions: 3727321
Number of successful extensions: 8161
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 8161
Number of HSP's gapped (non-prelim): 4
length of query: 2053
length of database: 24,830,863
effective HSP length: 96
effective length of query: 1957
effective length of database: 19,777,327
effective search space: 38704228939
effective search space used: 38704228939
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 69 (31.9 bits)