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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005014-TA|BGIBMGA005014-PA|undefined
         (2053 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical pr...   342   2e-93
Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical pr...    76   2e-13
Z81133-6|CAJ85766.1|  398|Caenorhabditis elegans Hypothetical pr...    69   4e-11
AL031630-2|CAA21000.1|  310|Caenorhabditis elegans Hypothetical ...    33   2.1  
U40409-3|ABO16455.1|  681|Caenorhabditis elegans Related to yeas...    32   5.0  
U40409-2|AAA81388.3|  759|Caenorhabditis elegans Related to yeas...    32   5.0  
U40409-1|ABO16456.1|  807|Caenorhabditis elegans Related to yeas...    32   5.0  

>Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical protein
            C14C10.5 protein.
          Length = 1908

 Score =  342 bits (840), Expect = 2e-93
 Identities = 320/1396 (22%), Positives = 590/1396 (42%), Gaps = 89/1396 (6%)

Query: 316  LPTSLESSYVALVKCARPYFELSATKEILDLLLPRINPWTADSYVLSQLV-VFLPVALH- 373
            +P    S    L+  ARPYF   + +E+LD + P +  W        +L+ +FL  A+  
Sbjct: 209  MPDGFRSDLHTLIFYARPYFSDESVQEVLDEVRPYMCIWDESCLRYWKLLDLFLCTAMPV 268

Query: 374  PRNSALGHELWFEKLMVLWDTCYNAQCGVWDLMIIFTGLAKRNPGVINWSQYAPRIFSRF 433
             R    G  +WF++    ++   N        + +F  L+   PG I+W+     IFSR 
Sbjct: 269  ERQLTHGCGIWFDEAWYWYEEISNNSLFETQAIKMFARLSVECPGHIDWTDKLDLIFSRL 328

Query: 434  LHALNLPVSYKDMQINNHYTLDTKHMASWIVWSICPDG--VVLKHLRCFMGGVESYLHSA 491
            L AL L       QI N      ++ + W+V+ +       ++ HLR     VES++H +
Sbjct: 329  LRALRLGHVTGLCQIFNQ-----EYGSIWLVFMMGTQSHEKLMSHLRDLFNQVESFMHPS 383

Query: 492  NSGRWSYKLRDFLKKLTKEFLNRYRRETEHKFKESWEN--QVPEHYKLREEDITEFINIV 549
            N+G  +  +   L KL    + R +RE   K +        +PEH +L +  + E +N++
Sbjct: 384  NNGLHTQHIMVLLSKLLSNTILRLKRERSEKTQHRTRTLTPIPEHMRLTQAHLDELVNLM 443

Query: 550  LEPTLQALYNRVDSLE-VSFALQNLATLRPAIVIPPLLEKFKTSLNSLTEPHRVTAAMSG 608
            L P L+ +       E VS A ++   L P I++P +L+    +L +L EPHR+   +  
Sbjct: 444  L-PCLKLMAFTKSCKELVSPAFRSACLLCPKIILPIVLDMVYPALETLVEPHRLLQTLGT 502

Query: 609  LAAVARPMVRG-PDAGYSEGPTHIVHILMAVLPGLDPNDIKKTLVSLHFILFFSWMVPLI 667
            L  V  P+V+  PDA      TH++ IL ++LPGLD NDI K +V+   I     M+P++
Sbjct: 503  LLGVLIPLVKDEPDADGKTYRTHVITILNSLLPGLDCNDISKCMVTYQIIGVIVNMIPIV 562

Query: 668  DCSSAHEYWPDXXXXXXXXXXXXAQIEDFVLVFFEKIFSIV------ESSVLEHVRLDTK 721
            DCS A     D            A  +  + +  +++F ++       SS   H  +  K
Sbjct: 563  DCSEAVHTRCDLTEDEKELCSATANFDSIISMLMDRMFEMLIAVGQTASSTSTHGSIAAK 622

Query: 722  ESDGMRSKADAVMEAALSSATTAVLMQCSPKIFKEALRKFKSFATQTTFETNVSGSMVGV 781
              + +    D +      S    +    S ++F  A+ K  + A +  F++ ++  ++G 
Sbjct: 623  TGNNIE---DQIFHRGTLSVFKGICRNSSTELFNIAVNKLYNVACEHVFDSRIANDVIGD 679

Query: 782  LLRVFARVDPESTLAAFXXXXXXXXXXXXXXXXXXXXXNPPRDLMYRLVLLMHLVECDGT 841
            +++V  +  PE     F                           ++ + +   +++    
Sbjct: 680  MMQVACKFHPEIAFQKF-FKLIISKLQGCITPEFYTDEKVEFGTLWWISIASRMIKVHPK 738

Query: 842  VLLKYVPRIIPVLDRALKI-QTYYALNRASEILAHMLISFNCIELKEWKSSTKDYSAAPQ 900
            +LL     +  ++D  + + +   A  +A  +L ++L     I++       K Y     
Sbjct: 739  LLLDNWHLVETLMDLVMPLKKCTTATEKALNVLDNVLDQLTSIQINSLVERRKMYDLPTD 798

Query: 901  TWLPVREWGHGCKLKDLSFKWHVPCKEEAECAQMLLDRYMKPEISKLKQWVNGDCEMSRE 960
             +L +R W    + K+ + +W +P +E  + A  LL  ++ P I  L    NG     +E
Sbjct: 799  QFLAIRHWAAPVEKKNWNPEWIIPTQESIDRATQLLRTWLVPTIDALNA-PNG--IPKKE 855

Query: 961  ERCRCFYVLVAVLSCGNFLPQPNEEPVLLLETQVPSTSIPYTNGVK----FSITLDGENV 1016
               R + +  A+L     LP      + L ++ + +        VK      I++DG+NV
Sbjct: 856  ILHRLYLIRSALLGACFSLPLLEGTILPLCDSHIINPENELVTVVKPKGTPEISIDGKNV 915

Query: 1017 RVAVTRLLIRVQERMLADKSDDTRGLELLTKVWERVVVMKGSRVGPSLEERLISYGALD- 1075
            R       I + + +L    DD + ++      E + +++G  +     + L +  +   
Sbjct: 916  RQMALDCTIGLIDWLLEHSPDDVKSIQ------EAISILRGLPMNRGYTKELYNTSSTSY 969

Query: 1076 RVLDGRAGPTNRFGGAGTSRLRMLTAEAARIHDESRVNLVCEAGITPIALKALHALAELS 1135
            RV   +    ++  G   S + M+  E   +    R+             +    L +++
Sbjct: 970  RVT--KTMLCDKLAG-NRSNIEMIVEEYVMLLHRKRLAQTQGWHYNEQHKRIQDTLLKVA 1026

Query: 1136 VNTYTSVRMLSQIRLYWMLNHYPYSYRTLVPKLAELLIKGGEGDEWHARHKGTLYMMLGP 1195
             +TY+  R  +Q  L   L  +PYSY+ +V  + E L  G   D  H + KG LY+++  
Sbjct: 1027 TSTYSENRAKAQNILLGKLREHPYSYKHIVNDILEFLQPG--NDVTHEQLKGALYLLIDG 1084

Query: 1196 RNAPLIAKQDWEVARTLWPAILKAPLSEKPSILKLEQAFGDTIHRNFPAVNTRLVIPQSA 1255
            +   L+ + ++E    +WPA++K   SEKP+I+ L +   + I  N+ +   +     + 
Sbjct: 1085 KKQSLMLRMEFEQQYKIWPALIKVQHSEKPTIIALLETAQNMIVDNYESYRLKYEWEPAN 1144

Query: 1256 IDAAARLL----TEEQLNDAEFVE-----MLKKAKQNETAFSDRNERLYNELILELVDLA 1306
            ++AA +LL        L DA+ ++      L+K K   T   ++++  Y  LI +L  LA
Sbjct: 1145 VEAAWKLLKAADETSPLYDADMLQGPSTAELEKYKNLLTEKYEKSKSNYFLLIEQLFTLA 1204

Query: 1307 ETPNIPWRRLELAFNMAVYCPSLQTAYPXXXXXXXXXXXXHDDVAVRRSAQRLAHYALKQ 1366
              P + WR L++A++M           P            +D V  RR A  +    LK 
Sbjct: 1205 NDPTLHWRPLDMAYSMLSMQVRRDCPLPDNVVKMFVRLLINDTVKTRRIASAVVASWLKM 1264

Query: 1367 RK-RPLHKIHVDPYELAGLPRPAQH-IP-GYRKDVEWVMWSEDRIPKNDEEWDR-PWLRS 1422
             K + + + +V PY+       A+H IP G+R D   +M+ E+++PK DEEWD   +   
Sbjct: 1265 TKPKAVKREYVIPYKAPNTAIGAKHPIPYGFRTDNRCMMYEEEKLPKTDEEWDSFQFCSK 1324

Query: 1423 PSFGFYQWPEKLV-------------------EGERYLFEFFDDDENVNKLVSFLTVEEK 1463
              +G Y WP KL+                   E E+Y+ + F D++ + +L    ++E K
Sbjct: 1325 QHWGIYTWPAKLITYAPLKEQTAIDRSYEQFSEVEKYIVDMFQDEKFMTRLRELFSIEMK 1384

Query: 1464 KGKDKFSGVRFLFFKFLFAHYGPRIADKFTAHALRCAAETREAPQXXXXXXXXXXXXXXX 1523
            K  + F+ V F  F+ LF  YG  +   F        A ++E  Q               
Sbjct: 1385 KEDEVFNAVHFSLFQGLFRCYGDVLTHAFRTQLEILLASSKEYEQKLAAEITAGLMNGSK 1444

Query: 1524 YWTRDDALKMYSDTLEIFKAGLTSVTPETMNDWGTALATGMEKMDPLRGATVVQGIVXXX 1583
             W  +   KM++    +       +  + + +WG A+AT    +     A +++ ++   
Sbjct: 1445 LWRYEKQRKMWNWLDPMLTKTFELMKEDGLRNWGVAIAT----VCGCSEARMLKPLI--- 1497

Query: 1584 XXXXXXXXXXXXXXXSFVVCARLHALQGAIGSLKWRTAPLSQILLKKLDAANFIQHPYQN 1643
                           ++   +R+  +Q A+   +WR   L   L++ +     +  P+ N
Sbjct: 1498 --DLLFKLVERPTDNAYAASSRMFLIQSALCQFEWRGVELWNKLVEMMKGC--LVQPFAN 1553

Query: 1644 VRESVGSLL--ATMFD 1657
            +R+ V   L  AT +D
Sbjct: 1554 LRDRVAISLVSATWYD 1569



 Score = 85.8 bits (203), Expect = 3e-16
 Identities = 42/131 (32%), Positives = 71/131 (54%), Gaps = 1/131 (0%)

Query: 1923 MRDSRLEVRQSAAKLLTGLMHCRALPDEQRTLRLLIRSARSKQLVERHFGVLGMCAYLSS 1982
            + D+++EVR+ A   L+ L+  +        +     +A SK  ++ H GVLG+ A + +
Sbjct: 1777 LNDNQIEVRERATDALSTLLQAKFFETTPELVTKFSTAAHSKDQIQGHAGVLGLSAIVLA 1836

Query: 1983 RPYSIGSKFGDVLSELSRH-TNAPDPVPATIRRALADFRRTHQDDWPKHRDQLSEDELDM 2041
             PYS+      VL  + R  T+    +   ++R L++F+RTHQD W +H  Q +ED+L +
Sbjct: 1837 FPYSVPEFLPGVLMTICRFATDKSATIREAVKRTLSEFKRTHQDSWREHEQQFNEDQLMV 1896

Query: 2042 LADLTSPPTYF 2052
            L DL   P Y+
Sbjct: 1897 LRDLLISPNYY 1907



 Score = 49.6 bits (113), Expect = 2e-05
 Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 3/114 (2%)

Query: 190 YIRIYGLKFSKADHIDLIKLAYELIIIPDLEPSKVHKFSTMFIMLTKKRQLISPEELKLP 249
           YI  YG +FSK +HI LIK+   L+    +  +      T++ +L KK   ++ ++L + 
Sbjct: 127 YIDYYGRRFSKEEHIQLIKIFLPLVKKGAIFRNVKIAMRTLYTLLCKK-DFLTRQDLVIE 185

Query: 250 WRPLYDLGQRIFDKNALHVGMFHYIRPDRSGKQGFDVFDLIRKLLSGHGVEDAL 303
           WRPL +L   +  KN    G+F  + PD        +    R   S   V++ L
Sbjct: 186 WRPLMELYVEVTFKNLEEDGLF--LMPDGFRSDLHTLIFYARPYFSDESVQEVL 237



 Score = 31.5 bits (68), Expect = 6.6
 Identities = 16/52 (30%), Positives = 26/52 (50%)

Query: 26  KEFLTNHLLPYASELDEESTRFLGQVKINLAKSVMLREMKPACGVWLSRLMK 77
           KE      LPY +EL+E++ +    +K  LA+S++L +       W   L K
Sbjct: 75  KEIWQLKKLPYGAELEEQANQHFLMIKKGLAESILLNDAASGFCHWTMELDK 126


>Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical
           protein T28B8.3a protein.
          Length = 1838

 Score = 76.2 bits (179), Expect = 2e-13
 Identities = 59/255 (23%), Positives = 117/255 (45%), Gaps = 18/255 (7%)

Query: 382 ELWFEKLMVLWDTCYNAQCGVWDLMIIFTGLAKRNPGVINWSQYAPRIFSRFLHALNLPV 441
           ELW   L    +T + A C   D ++    +A   PG  + S Y   +F++ +   +L V
Sbjct: 210 ELWEMYLKAEMNTSWTAHC--LDHIVEICTIA---PGAFDLSSYYDVLFTKMIRGFDLTV 264

Query: 442 SYKDMQINN-HYTLDTKHMASWIVWSICPDGVVLKHLRCFMGGVESYLHSANSGRWSYKL 500
               ++I N    + + ++A    ++I      L H +  +  +  ++H  N G  + ++
Sbjct: 265 REGKLEIGNGEEKISSFYLADICAYTIGGPNSSLSHFQRLIQYISFHVHPPNIGEHTDQI 324

Query: 501 RDFLKKLTKEFLNRYRRETEHKFKESWENQ-VPEHYKLREEDITEFINIVLEPTLQALYN 559
             FL++  + F  R  +E     + +WE +   + Y L++ DI   +  + +  +  ++N
Sbjct: 325 SMFLEQFMESFKERLNKE-----RLNWEKRKCSKDYYLKDSDIDAVVESISDLAIMLMFN 379

Query: 560 RVDSLEVSFAL-QNLATLRPAIVIPPLLEKFKTSLNSLTEPHRVTAAMSGLAAVARPMVR 618
                ++ + L + L T+    V P LL    +SL +++EPHR+T  +         ++R
Sbjct: 380 E----DIDYKLIKLLTTVNREYVAPKLLNHLYSSLTAVSEPHRLTTLIEAFTFFVYEIIR 435

Query: 619 GPDAGYSEGPTHIVH 633
            PDA Y   P +IV+
Sbjct: 436 TPDAEY-RTPRNIVY 449



 Score = 68.9 bits (161), Expect = 4e-11
 Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 4/174 (2%)

Query: 1882 NSWWARLACLDFAQPFLFYGLPFLCDSPDRAVRAEQFALKLMRDSRLEVRQSAAKLLTGL 1941
            NSW  RLA + F Q  ++  + F      R    E+   + + D  + VR+ AAK L   
Sbjct: 1667 NSWHVRLAVIKFVQAAVYSNI-FPMSQQSRRDDIEKLLFRAVYDREISVRKEAAKCLLLF 1725

Query: 1942 MHCRALPDEQRTLRLLIRSARSKQLVER--HFGVLGMCAYLSSRPYSIGSKFGDVLSELS 1999
            +HC  +    + +  L    +S+  +E   H   L + A++ + P+ + +     LS LS
Sbjct: 1726 IHCSYIQFSDQKIDKLANILQSETELEARAHGASLALGAFVLAFPFFLPTNIIKPLSLLS 1785

Query: 2000 RHTNAPDPVPATIRRALADFRRTHQDDWPKHRDQLSEDELDMLADLTSPPTYFA 2053
              ++    V  T+   + +FRR H+DDW + +  L  D L    + T+ P Y+A
Sbjct: 1786 SSSSNQAVVKKTMTETVREFRRQHRDDWEETKKILG-DALTFDIENTTAPAYYA 1838



 Score = 38.7 bits (86), Expect = 0.043
 Identities = 15/59 (25%), Positives = 25/59 (42%)

Query: 889 KSSTKDYSAAPQTWLPVREWGHGCKLKDLSFKWHVPCKEEAECAQMLLDRYMKPEISKL 947
           K+    +S     W P+  W      KD    W +P K +  C + + +++  P I KL
Sbjct: 765 KTEHNQFSEPFSEWNPIEFWAKCVHYKDTVVHWSIPAKADISCVERIANKFFFPYIQKL 823



 Score = 35.5 bits (78), Expect = 0.40
 Identities = 66/340 (19%), Positives = 135/340 (39%), Gaps = 24/340 (7%)

Query: 1107 HDESRVNLVCEA-GITPIALKALHALAELSVNTYTSVRMLSQIRLYWMLNHYPYSYRTLV 1165
            H ++++   CE    T    + L  L ELSVN Y +V+  +   L  +  +    +  L+
Sbjct: 970  HIQTQLYHRCEIRDATDFDERILKCLLELSVNDYFTVQKRASGYLKTISQNIRCRH-LLI 1028

Query: 1166 PKLAELLIKGGEGDEWHARHKGTLYMMLGPRNAPLIAKQDWEVARTLWPAILKAPLSEKP 1225
            P++ E+L      ++   R  G + + L  +   L+  +   +   +W A+L+  + +  
Sbjct: 1029 PRVVEILTDAKLVNK--NRLAGAMDLTLKLKWIKLVTPR---IRLIIWDAVLRIKVMDNV 1083

Query: 1226 SILKLEQAFGDTIHRNFPAVNTRLVIPQS------AIDAAARLLTEEQLNDAEFVEMLKK 1279
             I    +A    +   +     RL   ++       +   A LL +   +   F+     
Sbjct: 1084 EIRGRFEAIRKELKNFWREPIYRLATRETHDERNKKVAVVALLLIKPSSDWTPFLTEEAL 1143

Query: 1280 AKQNETAFSDRNERLYNELILELVDLA-----ETPNIPWRRLELAFNMAVYCPSLQTAYP 1334
              Q +T F    E+L + L L+LVD       +  N    R +LA +M +Y   ++    
Sbjct: 1144 KIQTDTWFD--YEKLSHTLRLKLVDNLFKNHIQNKNHHHTRGKLARSM-IYAAQMEACDS 1200

Query: 1335 XXXXXXXXXXXXHDDVAVRRSAQRLAHYALKQRKRPLHKIHVDPYELAGLPRPAQHIPGY 1394
                            +   + + LAH+ LK+ K+   +  + P +        +   G 
Sbjct: 1201 KTIRLLLEQLFDEHYTSRNEARETLAHW-LKENKQKTVREKIKPPKRVDHGVKLER--GI 1257

Query: 1395 RKDVEWVMWSEDRIPKNDEEWDRPWLRSPSFGFYQWPEKL 1434
            R+D  W+++  + +P  +++W+         G  +WPE +
Sbjct: 1258 REDNLWLVYDSENLPNTEQKWNEIVFVEKEKGACRWPESI 1297


>Z81133-6|CAJ85766.1|  398|Caenorhabditis elegans Hypothetical protein
            T28B8.3b protein.
          Length = 398

 Score = 68.9 bits (161), Expect = 4e-11
 Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 4/174 (2%)

Query: 1882 NSWWARLACLDFAQPFLFYGLPFLCDSPDRAVRAEQFALKLMRDSRLEVRQSAAKLLTGL 1941
            NSW  RLA + F Q  ++  + F      R    E+   + + D  + VR+ AAK L   
Sbjct: 227  NSWHVRLAVIKFVQAAVYSNI-FPMSQQSRRDDIEKLLFRAVYDREISVRKEAAKCLLLF 285

Query: 1942 MHCRALPDEQRTLRLLIRSARSKQLVER--HFGVLGMCAYLSSRPYSIGSKFGDVLSELS 1999
            +HC  +    + +  L    +S+  +E   H   L + A++ + P+ + +     LS LS
Sbjct: 286  IHCSYIQFSDQKIDKLANILQSETELEARAHGASLALGAFVLAFPFFLPTNIIKPLSLLS 345

Query: 2000 RHTNAPDPVPATIRRALADFRRTHQDDWPKHRDQLSEDELDMLADLTSPPTYFA 2053
              ++    V  T+   + +FRR H+DDW + +  L  D L    + T+ P Y+A
Sbjct: 346  SSSSNQAVVKKTMTETVREFRRQHRDDWEETKKILG-DALTFDIENTTAPAYYA 398


>AL031630-2|CAA21000.1|  310|Caenorhabditis elegans Hypothetical
           protein Y38H6C.2 protein.
          Length = 310

 Score = 33.1 bits (72), Expect = 2.1
 Identities = 22/94 (23%), Positives = 48/94 (51%), Gaps = 3/94 (3%)

Query: 370 VALHPRNSALGHELWFEKLMVLWDTCYNAQCGVWDLMIIFTGLAKRNPGVINWSQYAPRI 429
           +AL  + S+L ++   + ++++  +   A+  +  ++ I TGL   +P ++   +Y   I
Sbjct: 193 IALRKKTSSLRNDNGRQLVILMAISFITAELPI-GILYISTGLLASHPAIVTTIRYLMDI 251

Query: 430 FSRFLHALNLPVSYK-DMQINNHYTLDTKHMASW 462
           F+ F+ A+N  V +   + +N HY    K +  W
Sbjct: 252 FTSFV-AINATVHFLICLGVNAHYRDTVKELFRW 284


>U40409-3|ABO16455.1|  681|Caenorhabditis elegans Related to yeast
           vacuolar proteinsorting factor protein 41, isoform b
           protein.
          Length = 681

 Score = 31.9 bits (69), Expect = 5.0
 Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 2/47 (4%)

Query: 529 NQVPEH--YKLREEDITEFINIVLEPTLQALYNRVDSLEVSFALQNL 573
           N + +H  + L ++ ITE +NI  E  L+ L +  DS+E SF ++ +
Sbjct: 449 NVIDKHQLFDLVKDQITELMNINSERALRLLLDNADSVEPSFVMEKI 495


>U40409-2|AAA81388.3|  759|Caenorhabditis elegans Related to yeast
           vacuolar proteinsorting factor protein 41, isoform a
           protein.
          Length = 759

 Score = 31.9 bits (69), Expect = 5.0
 Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 2/47 (4%)

Query: 529 NQVPEH--YKLREEDITEFINIVLEPTLQALYNRVDSLEVSFALQNL 573
           N + +H  + L ++ ITE +NI  E  L+ L +  DS+E SF ++ +
Sbjct: 449 NVIDKHQLFDLVKDQITELMNINSERALRLLLDNADSVEPSFVMEKI 495


>U40409-1|ABO16456.1|  807|Caenorhabditis elegans Related to yeast
           vacuolar proteinsorting factor protein 41, isoform c
           protein.
          Length = 807

 Score = 31.9 bits (69), Expect = 5.0
 Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 2/47 (4%)

Query: 529 NQVPEH--YKLREEDITEFINIVLEPTLQALYNRVDSLEVSFALQNL 573
           N + +H  + L ++ ITE +NI  E  L+ L +  DS+E SF ++ +
Sbjct: 497 NVIDKHQLFDLVKDQITELMNINSERALRLLLDNADSVEPSFVMEKI 543


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.322    0.136    0.415 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,771,093
Number of Sequences: 27539
Number of extensions: 1918222
Number of successful extensions: 4257
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4222
Number of HSP's gapped (non-prelim): 18
length of query: 2053
length of database: 12,573,161
effective HSP length: 93
effective length of query: 1960
effective length of database: 10,012,034
effective search space: 19623586640
effective search space used: 19623586640
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 67 (31.1 bits)

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