SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005010-TA|BGIBMGA005010-PA|IPR010971|Ubiquinone
biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, IPR003042|Aromatic-ring
hydroxylase, IPR002938|Monooxygenase, FAD-binding
         (309 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC014181-1|AAH14181.1|  468|Homo sapiens coenzyme Q6 homolog, mo...   275   1e-73
AK222965-1|BAD96685.1|  468|Homo sapiens CGI-10 protein isoform ...   275   1e-73
AF132944-1|AAD27719.1|  468|Homo sapiens CGI-10 protein protein.      274   3e-73
BC014483-1|AAH14483.1|  468|Homo sapiens coenzyme Q6 homolog, mo...   274   3e-73
D78129-1|BAA11209.1|  349|Homo sapiens squalene epoxidase protein.     40   0.015
BC017033-1|AAH17033.1|  574|Homo sapiens squalene epoxidase prot...    40   0.015
AF098865-1|AAD10823.1|  574|Homo sapiens squalene epoxidase prot...    40   0.015
Y13153-1|CAA73613.1|  486|Homo sapiens kynurenine 3-monooxygenas...    37   0.10 
BC005297-1|AAH05297.1|  407|Homo sapiens KMO protein protein.          37   0.10 
AL591898-4|CAI13906.1|  452|Homo sapiens kynurenine 3-monooxygen...    37   0.10 
AL591898-3|CAI13905.1|  473|Homo sapiens kynurenine 3-monooxygen...    37   0.10 
AL591898-2|CAI13907.1|  486|Homo sapiens kynurenine 3-monooxygen...    37   0.10 
AL133390-4|CAM28228.1|  486|Homo sapiens kynurenine 3-monooxygen...    37   0.10 
AL133390-3|CAM28227.1|  452|Homo sapiens kynurenine 3-monooxygen...    37   0.10 
AL133390-2|CAM28226.1|  473|Homo sapiens kynurenine 3-monooxygen...    37   0.10 
AF056032-1|AAC62615.1|  486|Homo sapiens kynurenine 3-hydroxylas...    37   0.10 
D78130-1|BAA22372.1|  574|Homo sapiens squalene epoxidase protein.     36   0.18 
BC125018-1|AAI25019.1| 1961|Homo sapiens KIAA0310 protein protein.     31   3.9  
BC046246-1|AAH46246.1| 1246|Homo sapiens jumonji, AT rich intera...    31   5.1  
BC046184-1|AAH46184.1|  369|Homo sapiens JARID2 protein protein.       31   5.1  
AL136162-1|CAI15719.1| 1246|Homo sapiens Jumonji, AT rich intera...    31   5.1  
AL021938-1|CAI19873.1| 1246|Homo sapiens Jumonji, AT rich intera...    31   5.1  

>BC014181-1|AAH14181.1|  468|Homo sapiens coenzyme Q6 homolog,
           monooxygenase (S. cerevisiae) protein.
          Length = 468

 Score =  275 bits (675), Expect = 1e-73
 Identities = 132/265 (49%), Positives = 177/265 (66%)

Query: 44  MVIGADGANSAVRRAMGVQYLSWNYDQMGVLATLYLAEETDNTTAWQRWLPSGPIAILPL 103
           ++IGADG NS VR+A+G+Q +SWNYDQ  V+ATL+L+E T+N  AWQR+LPSGPIA+LPL
Sbjct: 203 LLIGADGHNSGVRQAVGIQNVSWNYDQSAVVATLHLSEATENNVAWQRFLPSGPIALLPL 262

Query: 104 DSQRSSLVWSTWEDNAKRLLKLPEEQFVDELNDALWKQYPRSGAVEGCMSWVSGCLRRAG 163
               SSLVWST  ++A  L+ + EE+FVD +N A W     +  ++   + +   +    
Sbjct: 263 SDTLSSLVWSTSHEHAAELVSMDEEKFVDAVNSAFWSDADHTDFIDTAGAMLQYAVSLLK 322

Query: 164 LPDGAARQLPPSVQGVASSSRAAFPLAFGHSTRYVANGVALVGDAAHRVHPLAGQGVNLG 223
               +ARQLPPSV  V + SR  FPL  GH+  YV   VAL+GDAAHRVHPLAGQGVN+G
Sbjct: 323 PTKVSARQLPPSVARVDAKSRVLFPLGLGHAAEYVRPRVALIGDAAHRVHPLAGQGVNMG 382

Query: 224 FGDVKELTELLADATYGGFDINDPSYLQRYESNRQRHNVPTQLAIEALHRLYTVDLPPVV 283
           FGD+  L   L+ A + G D+   S+L  YE+ RQRHN     A + L RLY+    P+V
Sbjct: 383 FGDISSLAHHLSTAAFNGKDLGSVSHLTGYETERQRHNTALLAATDLLKRLYSTSASPLV 442

Query: 284 LLRSVGLQLTNALHPVKKLLMSHAA 308
           LLR+ GLQ TNA+ P+K+ +M+ A+
Sbjct: 443 LLRTWGLQATNAVSPLKEQIMAFAS 467


>AK222965-1|BAD96685.1|  468|Homo sapiens CGI-10 protein isoform a
           variant protein.
          Length = 468

 Score =  275 bits (675), Expect = 1e-73
 Identities = 132/265 (49%), Positives = 177/265 (66%)

Query: 44  MVIGADGANSAVRRAMGVQYLSWNYDQMGVLATLYLAEETDNTTAWQRWLPSGPIAILPL 103
           ++IGADG NS VR+A+G+Q +SWNYDQ  V+ATL+L+E T+N  AWQR+LPSGPIA+LPL
Sbjct: 203 LLIGADGHNSGVRQAVGIQNVSWNYDQSAVVATLHLSEATENNVAWQRFLPSGPIALLPL 262

Query: 104 DSQRSSLVWSTWEDNAKRLLKLPEEQFVDELNDALWKQYPRSGAVEGCMSWVSGCLRRAG 163
               SSLVWST  ++A  L+ + EE+FVD +N A W     +  ++   + +   +    
Sbjct: 263 SDTLSSLVWSTSHEHAAELVSMDEEKFVDAVNSAFWSDADHTDFIDTAGAMLQYAVSLLK 322

Query: 164 LPDGAARQLPPSVQGVASSSRAAFPLAFGHSTRYVANGVALVGDAAHRVHPLAGQGVNLG 223
               +ARQLPPSV  V + SR  FPL  GH+  YV   VAL+GDAAHRVHPLAGQGVN+G
Sbjct: 323 PTKVSARQLPPSVARVDAKSRVLFPLGLGHAAEYVRPRVALIGDAAHRVHPLAGQGVNMG 382

Query: 224 FGDVKELTELLADATYGGFDINDPSYLQRYESNRQRHNVPTQLAIEALHRLYTVDLPPVV 283
           FGD+  L   L+ A + G D+   S+L  YE+ RQRHN     A + L RLY+    P+V
Sbjct: 383 FGDISSLAHHLSTAAFNGKDLGSMSHLTGYETERQRHNTALLAATDLLKRLYSTSASPLV 442

Query: 284 LLRSVGLQLTNALHPVKKLLMSHAA 308
           LLR+ GLQ TNA+ P+K+ +M+ A+
Sbjct: 443 LLRTWGLQATNAVSPLKEQIMAFAS 467


>AF132944-1|AAD27719.1|  468|Homo sapiens CGI-10 protein protein.
          Length = 468

 Score =  274 bits (672), Expect = 3e-73
 Identities = 132/265 (49%), Positives = 177/265 (66%)

Query: 44  MVIGADGANSAVRRAMGVQYLSWNYDQMGVLATLYLAEETDNTTAWQRWLPSGPIAILPL 103
           ++IGADG NS VR+A+G+Q +SWNYDQ  V+ATL+L+E T+N  AWQR+LPSGPIA+LPL
Sbjct: 203 LLIGADGHNSGVRQAVGIQNVSWNYDQSAVVATLHLSEATENNVAWQRFLPSGPIALLPL 262

Query: 104 DSQRSSLVWSTWEDNAKRLLKLPEEQFVDELNDALWKQYPRSGAVEGCMSWVSGCLRRAG 163
               SSLVWST  ++A  L+ + EE+FVD +N A W     +  ++   + +   +    
Sbjct: 263 SDTLSSLVWSTSHEHAAELVSMDEEKFVDAVNSAFWSDADHTDFIDTAGAMLQYPVSLLK 322

Query: 164 LPDGAARQLPPSVQGVASSSRAAFPLAFGHSTRYVANGVALVGDAAHRVHPLAGQGVNLG 223
               +ARQLPPSV  V + SR  FPL  GH+  YV   VAL+GDAAHRVHPLAGQGVN+G
Sbjct: 323 PTKVSARQLPPSVPWVDAKSRVLFPLGLGHAAEYVRPRVALIGDAAHRVHPLAGQGVNMG 382

Query: 224 FGDVKELTELLADATYGGFDINDPSYLQRYESNRQRHNVPTQLAIEALHRLYTVDLPPVV 283
           FGD+  L   L+ A + G D+   S+L  YE+ RQRHN     A + L RLY+    P+V
Sbjct: 383 FGDISSLAHHLSTAAFNGKDLGSVSHLTGYETERQRHNTALLAATDLLKRLYSTSASPLV 442

Query: 284 LLRSVGLQLTNALHPVKKLLMSHAA 308
           LLR+ GLQ TNA+ P+K+ +M+ A+
Sbjct: 443 LLRTWGLQATNAVSPLKEQIMAFAS 467


>BC014483-1|AAH14483.1|  468|Homo sapiens coenzyme Q6 homolog,
           monooxygenase (S. cerevisiae) protein.
          Length = 468

 Score =  274 bits (671), Expect = 3e-73
 Identities = 131/265 (49%), Positives = 177/265 (66%)

Query: 44  MVIGADGANSAVRRAMGVQYLSWNYDQMGVLATLYLAEETDNTTAWQRWLPSGPIAILPL 103
           ++IGADG NS VR+A+G+Q +SWNYDQ  V+ATL+L+E T+N  AWQR+LPSGPIA+LPL
Sbjct: 203 LLIGADGHNSGVRQAVGIQNVSWNYDQSAVVATLHLSEATENNVAWQRFLPSGPIALLPL 262

Query: 104 DSQRSSLVWSTWEDNAKRLLKLPEEQFVDELNDALWKQYPRSGAVEGCMSWVSGCLRRAG 163
               SSLVWST  ++A  L+ + E++FVD +N A W     +  ++   + +   +    
Sbjct: 263 SDTLSSLVWSTSHEHAAELVSMDEKKFVDAVNSAFWSDADHTDFIDTAGAMLQYAVSLLK 322

Query: 164 LPDGAARQLPPSVQGVASSSRAAFPLAFGHSTRYVANGVALVGDAAHRVHPLAGQGVNLG 223
               +ARQLPPSV  V + SR  FPL  GH+  YV   VAL+GDAAHRVHPLAGQGVN+G
Sbjct: 323 PTKVSARQLPPSVARVDAKSRVLFPLGLGHAAEYVRPRVALIGDAAHRVHPLAGQGVNMG 382

Query: 224 FGDVKELTELLADATYGGFDINDPSYLQRYESNRQRHNVPTQLAIEALHRLYTVDLPPVV 283
           FGD+  L   L+ A + G D+   S+L  YE+ RQRHN     A + L RLY+    P+V
Sbjct: 383 FGDISSLAHHLSTAAFNGKDLGSVSHLTGYETERQRHNTALLAATDLLKRLYSTSASPLV 442

Query: 284 LLRSVGLQLTNALHPVKKLLMSHAA 308
           LLR+ GLQ TNA+ P+K+ +M+ A+
Sbjct: 443 LLRTWGLQATNAVSPLKEQIMAFAS 467


>D78129-1|BAA11209.1|  349|Homo sapiens squalene epoxidase protein.
          Length = 349

 Score = 39.5 bits (88), Expect = 0.015
 Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 3/105 (2%)

Query: 174 PSVQGVASSSRAAFPLAFGHSTRYVANGVALVGDAAHRVHPLAGQGVNLGFGDVKELTEL 233
           P ++   +S   + P +F   +     GV L+GDA +  HPL G G+ + F D+K   +L
Sbjct: 189 PFLEATDNSHLRSMPASFLPPSSVKKRGVLLLGDAYNMRHPLTGGGMTVAFKDIKLWRKL 248

Query: 234 LADA--TYGGFDINDPSYLQRYESNRQRHNVPTQLAIEALHRLYT 276
           L      Y    I + +    Y + +  H+    +  +AL+ L++
Sbjct: 249 LKGIPDLYDDAAIFE-AKKSFYWARKTSHSFVVNILAQALYELFS 292


>BC017033-1|AAH17033.1|  574|Homo sapiens squalene epoxidase
           protein.
          Length = 574

 Score = 39.5 bits (88), Expect = 0.015
 Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 3/105 (2%)

Query: 174 PSVQGVASSSRAAFPLAFGHSTRYVANGVALVGDAAHRVHPLAGQGVNLGFGDVKELTEL 233
           P ++   +S   + P +F   +     GV L+GDA +  HPL G G+ + F D+K   +L
Sbjct: 375 PFLEATDNSHLRSMPASFLPPSSVKKRGVLLLGDAYNMRHPLTGGGMTVAFKDIKLWRKL 434

Query: 234 LADA--TYGGFDINDPSYLQRYESNRQRHNVPTQLAIEALHRLYT 276
           L      Y    I + +    Y + +  H+    +  +AL+ L++
Sbjct: 435 LKGIPDLYDDAAIFE-AKKSFYWARKTSHSFVVNILAQALYELFS 478


>AF098865-1|AAD10823.1|  574|Homo sapiens squalene epoxidase
           protein.
          Length = 574

 Score = 39.5 bits (88), Expect = 0.015
 Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 3/105 (2%)

Query: 174 PSVQGVASSSRAAFPLAFGHSTRYVANGVALVGDAAHRVHPLAGQGVNLGFGDVKELTEL 233
           P ++   +S   + P +F   +     GV L+GDA +  HPL G G+ + F D+K   +L
Sbjct: 375 PFLEATDNSHLRSMPASFLPPSSVKKRGVLLLGDAYNMRHPLTGGGMTVAFKDIKLWRKL 434

Query: 234 LADA--TYGGFDINDPSYLQRYESNRQRHNVPTQLAIEALHRLYT 276
           L      Y    I + +    Y + +  H+    +  +AL+ L++
Sbjct: 435 LKGIPDLYDDAAIFE-AKKSFYWARKTSHSFVVNILAQALYELFS 478


>Y13153-1|CAA73613.1|  486|Homo sapiens kynurenine 3-monooxygenase
           protein.
          Length = 486

 Score = 36.7 bits (81), Expect = 0.10
 Identities = 16/31 (51%), Positives = 20/31 (64%)

Query: 204 LVGDAAHRVHPLAGQGVNLGFGDVKELTELL 234
           L+GDAAH + P  GQG+N GF D     EL+
Sbjct: 301 LLGDAAHAIVPFFGQGMNAGFEDCLVFDELM 331


>BC005297-1|AAH05297.1|  407|Homo sapiens KMO protein protein.
          Length = 407

 Score = 36.7 bits (81), Expect = 0.10
 Identities = 16/31 (51%), Positives = 20/31 (64%)

Query: 204 LVGDAAHRVHPLAGQGVNLGFGDVKELTELL 234
           L+GDAAH + P  GQG+N GF D     EL+
Sbjct: 301 LLGDAAHAIVPFFGQGMNAGFEDCLVFDELM 331


>AL591898-4|CAI13906.1|  452|Homo sapiens kynurenine 3-monooxygenase
           (kynurenine 3-hydroxylase) protein.
          Length = 452

 Score = 36.7 bits (81), Expect = 0.10
 Identities = 16/31 (51%), Positives = 20/31 (64%)

Query: 204 LVGDAAHRVHPLAGQGVNLGFGDVKELTELL 234
           L+GDAAH + P  GQG+N GF D     EL+
Sbjct: 301 LLGDAAHAIVPFFGQGMNAGFEDCLVFDELM 331


>AL591898-3|CAI13905.1|  473|Homo sapiens kynurenine 3-monooxygenase
           (kynurenine 3-hydroxylase) protein.
          Length = 473

 Score = 36.7 bits (81), Expect = 0.10
 Identities = 16/31 (51%), Positives = 20/31 (64%)

Query: 204 LVGDAAHRVHPLAGQGVNLGFGDVKELTELL 234
           L+GDAAH + P  GQG+N GF D     EL+
Sbjct: 301 LLGDAAHAIVPFFGQGMNAGFEDCLVFDELM 331


>AL591898-2|CAI13907.1|  486|Homo sapiens kynurenine 3-monooxygenase
           (kynurenine 3-hydroxylase) protein.
          Length = 486

 Score = 36.7 bits (81), Expect = 0.10
 Identities = 16/31 (51%), Positives = 20/31 (64%)

Query: 204 LVGDAAHRVHPLAGQGVNLGFGDVKELTELL 234
           L+GDAAH + P  GQG+N GF D     EL+
Sbjct: 301 LLGDAAHAIVPFFGQGMNAGFEDCLVFDELM 331


>AL133390-4|CAM28228.1|  486|Homo sapiens kynurenine 3-monooxygenase
           (kynurenine 3-hydroxylase) protein.
          Length = 486

 Score = 36.7 bits (81), Expect = 0.10
 Identities = 16/31 (51%), Positives = 20/31 (64%)

Query: 204 LVGDAAHRVHPLAGQGVNLGFGDVKELTELL 234
           L+GDAAH + P  GQG+N GF D     EL+
Sbjct: 301 LLGDAAHAIVPFFGQGMNAGFEDCLVFDELM 331


>AL133390-3|CAM28227.1|  452|Homo sapiens kynurenine 3-monooxygenase
           (kynurenine 3-hydroxylase) protein.
          Length = 452

 Score = 36.7 bits (81), Expect = 0.10
 Identities = 16/31 (51%), Positives = 20/31 (64%)

Query: 204 LVGDAAHRVHPLAGQGVNLGFGDVKELTELL 234
           L+GDAAH + P  GQG+N GF D     EL+
Sbjct: 301 LLGDAAHAIVPFFGQGMNAGFEDCLVFDELM 331


>AL133390-2|CAM28226.1|  473|Homo sapiens kynurenine 3-monooxygenase
           (kynurenine 3-hydroxylase) protein.
          Length = 473

 Score = 36.7 bits (81), Expect = 0.10
 Identities = 16/31 (51%), Positives = 20/31 (64%)

Query: 204 LVGDAAHRVHPLAGQGVNLGFGDVKELTELL 234
           L+GDAAH + P  GQG+N GF D     EL+
Sbjct: 301 LLGDAAHAIVPFFGQGMNAGFEDCLVFDELM 331


>AF056032-1|AAC62615.1|  486|Homo sapiens kynurenine 3-hydroxylase
           protein.
          Length = 486

 Score = 36.7 bits (81), Expect = 0.10
 Identities = 16/31 (51%), Positives = 20/31 (64%)

Query: 204 LVGDAAHRVHPLAGQGVNLGFGDVKELTELL 234
           L+GDAAH + P  GQG+N GF D     EL+
Sbjct: 301 LLGDAAHAIVPFFGQGMNAGFEDCLVFDELM 331


>D78130-1|BAA22372.1|  574|Homo sapiens squalene epoxidase protein.
          Length = 574

 Score = 35.9 bits (79), Expect = 0.18
 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 3/78 (3%)

Query: 201 GVALVGDAAHRVHPLAGQGVNLGFGDVKELTELLADA--TYGGFDINDPSYLQRYESNRQ 258
           GV L+GDA +  HPL G G+ + F D+K   +LL      Y    I + +    Y + + 
Sbjct: 402 GVLLLGDAYNMRHPLTGGGMTVAFKDIKLWRKLLKGIPDLYDDAAIFEAN-KSFYWARKT 460

Query: 259 RHNVPTQLAIEALHRLYT 276
            H+    +  +AL+ L++
Sbjct: 461 SHSFVVNILAQALYELFS 478


>BC125018-1|AAI25019.1| 1961|Homo sapiens KIAA0310 protein protein.
          Length = 1961

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)

Query: 123  LKLPEEQFVDELNDALWKQYPRSGAVEGCMSWVSGCLRRAGLPDGAARQLPPSVQGVASS 182
            L +P   FV     ++  Q  RSG  +G ++  S       LPDG  R+ P + +G+A+ 
Sbjct: 1848 LPIPSNLFVPTPVSSVRPQ-GRSGRNDGLLALSSPDAEEPQLPDGTGREGPAAARGLANP 1906

Query: 183  SRAAFPLAFG 192
              A  P A G
Sbjct: 1907 EPAPEPKAPG 1916


>BC046246-1|AAH46246.1| 1246|Homo sapiens jumonji, AT rich interactive
            domain 2 protein.
          Length = 1246

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 3/67 (4%)

Query: 120  KRLLKLPEEQFVDELNDALWKQYPRSGAVEGCMSWVSGCLRRAGLPDGAARQLPPSVQGV 179
            K + +  EEQ +  +N    K   ++G++E C+S  +    + G    A   +PPS    
Sbjct: 1179 KLMYRYDEEQIISLVNQICGKVSGKNGSIENCLSKPT---PKRGPRKRATVDVPPSRLSA 1235

Query: 180  ASSSRAA 186
            +SSS++A
Sbjct: 1236 SSSSKSA 1242


>BC046184-1|AAH46184.1|  369|Homo sapiens JARID2 protein protein.
          Length = 369

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 3/67 (4%)

Query: 120 KRLLKLPEEQFVDELNDALWKQYPRSGAVEGCMSWVSGCLRRAGLPDGAARQLPPSVQGV 179
           K + +  EEQ +  +N    K   ++G++E C+S  +    + G    A   +PPS    
Sbjct: 302 KLMYRYDEEQIISLVNQICGKVSGKNGSIENCLSKPT---PKRGPRKRATVDVPPSRLSA 358

Query: 180 ASSSRAA 186
           +SSS++A
Sbjct: 359 SSSSKSA 365


>AL136162-1|CAI15719.1| 1246|Homo sapiens Jumonji, AT rich interactive
            domain 2 protein.
          Length = 1246

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 3/67 (4%)

Query: 120  KRLLKLPEEQFVDELNDALWKQYPRSGAVEGCMSWVSGCLRRAGLPDGAARQLPPSVQGV 179
            K + +  EEQ +  +N    K   ++G++E C+S  +    + G    A   +PPS    
Sbjct: 1179 KLMYRYDEEQIISLVNQICGKVSGKNGSIENCLSKPT---PKRGPRKRATVDVPPSRLSA 1235

Query: 180  ASSSRAA 186
            +SSS++A
Sbjct: 1236 SSSSKSA 1242


>AL021938-1|CAI19873.1| 1246|Homo sapiens Jumonji, AT rich interactive
            domain 2 protein.
          Length = 1246

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 3/67 (4%)

Query: 120  KRLLKLPEEQFVDELNDALWKQYPRSGAVEGCMSWVSGCLRRAGLPDGAARQLPPSVQGV 179
            K + +  EEQ +  +N    K   ++G++E C+S  +    + G    A   +PPS    
Sbjct: 1179 KLMYRYDEEQIISLVNQICGKVSGKNGSIENCLSKPT---PKRGPRKRATVDVPPSRLSA 1235

Query: 180  ASSSRAA 186
            +SSS++A
Sbjct: 1236 SSSSKSA 1242


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.318    0.133    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,625,606
Number of Sequences: 224733
Number of extensions: 1968449
Number of successful extensions: 3536
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3505
Number of HSP's gapped (non-prelim): 31
length of query: 309
length of database: 73,234,838
effective HSP length: 90
effective length of query: 219
effective length of database: 53,008,868
effective search space: 11608942092
effective search space used: 11608942092
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 65 (30.3 bits)

- SilkBase 1999-2023 -