GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA005007-TA|BGIBMGA005007-PA|undefined
         (169 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    23   1.6  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   2.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   4.9  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   6.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   6.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   8.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   8.5  

>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 15/55 (27%), Positives = 27/55 (49%)

Query: 45  TSAASLASGDEAFRDLDHALVNLAKLLSTVAAKGAEPGSSYRKRLREGAAMVRTK 99
           T+++S A+G E   D   +  + + LLS  A+K  E      + LR     ++T+
Sbjct: 414 TTSSSSAAGGEGLADRRGSESSDSVLLSPEASKATEAVEFIAEHLRNEDLYIQTR 468


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 19  TMPAPQWAPVRRRGAVSPATSVESMSTSAASLASGDEAFRDL 60
           T+  P  + +   G   P TS+ + STS  S+    +   D+
Sbjct: 838 TINTPTTSVISMSGTTVPITSLPASSTSINSITVEKDVINDV 879


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query: 137 PARSEPPMILINPG 150
           P+  + PMIL+ PG
Sbjct: 961 PSEPKAPMILVGPG 974


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 9/21 (42%), Positives = 16/21 (76%)

Query: 112 DSRESRILGDSPALREGTPLS 132
           +S ES+++GD  +LRE T ++
Sbjct: 408 NSCESQMMGDEMSLRELTQVT 428


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 91  EGAAMVRTKLIPTMSKLVAQLDSRESRILGDSPALREGTPLS 132
           E A  V +  +PT  +  A   + E  + G    L +  PLS
Sbjct: 147 ENAVKVNSVQVPTDDEPYASFKAMEDSVGGKCEVLYDIAPLS 188


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 112 DSRESRILGDSPALREGTPLSPMPAPARS 140
           DSR   +    P  + GT +SP P   R+
Sbjct: 883 DSRNPALALAEPYNQRGTVVSPPPTKRRT 911


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 112 DSRESRILGDSPALREGTPLSPMPAPARS 140
           DSR   +    P  + GT +SP P   R+
Sbjct: 921 DSRNPALALAEPYNQRGTVVSPPPTKRRT 949


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.314    0.128    0.363 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,202
Number of Sequences: 429
Number of extensions: 1820
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 169
length of database: 140,377
effective HSP length: 53
effective length of query: 116
effective length of database: 117,640
effective search space: 13646240
effective search space used: 13646240
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 41 (20.6 bits)