Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA005002-TA|BGIBMGA005002-PA|IPR011046|WD40-like,
IPR001680|WD-40 repeat
(473 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF155110-1|AAD42876.1| 815|Homo sapiens NY-REN-45 antigen protein. 489 e-138
BC126173-1|AAI26174.1| 815|Homo sapiens potassium channel tetra... 489 e-138
BC117188-1|AAI17189.1| 815|Homo sapiens potassium channel tetra... 489 e-138
BC013868-1|AAH13868.1| 736|Homo sapiens KCTD3 protein protein. 489 e-138
AL365315-1|CAD20310.1| 815|Homo sapiens potassium channel tetra... 489 e-138
BC094879-1|AAH94879.1| 813|Homo sapiens potassium channel tetra... 488 e-137
AF258553-1|AAG23756.1| 707|Homo sapiens PP203 protein. 466 e-131
BC022855-1|AAH22855.1| 707|Homo sapiens SH3KBP1 binding protein... 463 e-130
BC007653-1|AAH07653.1| 485|Homo sapiens SHKBP1 protein protein. 433 e-121
AL365315-3|CAH71927.1| 167|Homo sapiens potassium channel tetra... 231 3e-60
AK075057-1|BAC11374.1| 305|Homo sapiens protein ( Homo sapiens ... 68 8e-11
AL365315-2|CAH71926.1| 212|Homo sapiens potassium channel tetra... 42 0.005
CR533508-1|CAG38539.1| 473|Homo sapiens MGC8407 protein. 34 0.94
BC019256-1|AAH19256.1| 501|Homo sapiens CaM kinase-like vesicle... 34 0.94
BC017363-1|AAH17363.1| 501|Homo sapiens CaM kinase-like vesicle... 34 0.94
BC005828-1|AAH05828.1| 501|Homo sapiens CaM kinase-like vesicle... 34 0.94
BC001921-1|AAH01921.1| 501|Homo sapiens CaM kinase-like vesicle... 34 0.94
BC000497-1|AAH00497.1| 501|Homo sapiens CaM kinase-like vesicle... 34 0.94
AK074856-1|BAC11248.1| 501|Homo sapiens protein ( Homo sapiens ... 34 0.94
Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein. 32 3.8
AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc fi... 32 3.8
AB007894-1|BAA23707.1| 1571|Homo sapiens KIAA0434 protein. 32 3.8
U29607-1|AAA82930.1| 478|Homo sapiens methionine aminopeptidase... 32 5.0
U13261-1|AAC63402.1| 478|Homo sapiens eIF-2-associated p67 homo... 32 5.0
BC013782-1|AAH13782.1| 478|Homo sapiens methionyl aminopeptidas... 32 5.0
BC015360-1|AAH15360.1| 281|Homo sapiens Unknown (protein for IM... 31 8.8
AF380176-1|AAK57515.1| 1431|Homo sapiens HBV pX associated prote... 31 8.8
>AF155110-1|AAD42876.1| 815|Homo sapiens NY-REN-45 antigen protein.
Length = 815
Score = 489 bits (1207), Expect = e-138
Identities = 249/445 (55%), Positives = 308/445 (69%), Gaps = 31/445 (6%)
Query: 24 DNSKVHIIKAHHNWVVVAYAHFVTGYRLTDSCGWYVVFQSPVQDSVIERIALNAKXXXXX 83
D KV I+ HHNW+V AYAHF YR+ +S GW VF SP D IER+ALNAK
Sbjct: 183 DPRKVLIVAGHHNWIVAAYAHFAVWYRIKESSGWQQVFTSPYLDWTIERVALNAKVVGGP 242
Query: 84 XXXXXXXXXXDVMLGIASGPLVKLWAFSTHSEPVRRTLIGSFNLGVRIEHLLFVGPQLVA 143
D M+ +AS + LW+ IG F+LGV ++ L F+G QLVA
Sbjct: 243 HGDK------DKMVAVASESSIILWSVQDGGSGSE---IGVFSLGVPVDALFFIGNQLVA 293
Query: 144 LSGAGSRSKAGVWHTSTQHWQTQDVAHLTTYDTAGSFLLLGTATGAINYIDMQKFPLRMK 203
S G K GVW+ TQHWQ QDV +T+YDTAGSFLLLG G+I YIDMQKFPLRMK
Sbjct: 294 TSHTG---KVGVWNAVTQHWQVQDVVPITSYDTAGSFLLLGCNNGSIYYIDMQKFPLRMK 350
Query: 204 DNDLLVTQLYKDPNLEPITAISVYLTPKTNLCGNWIEIAYGTRYGSVRVIVQHPETVGHG 263
DNDLLVT+LY DP+ + ITA+SVYLTPKT++ GNWIEIAYGT G+VRVIVQHPETVG G
Sbjct: 351 DNDLLVTELYHDPSNDAITALSVYLTPKTSVSGNWIEIAYGTSSGAVRVIVQHPETVGSG 410
Query: 264 PQLFQTFTVHQSPITKVSLSENYLISVCSEYNHVRSWRVTRFRGMISTQPGTTPNAAFKV 323
PQLFQTFTVH+SP+TK+ LSE +L+SVC++ NHVR+W VTRFRGMISTQPG+TP A+FK+
Sbjct: 411 PQLFQTFTVHRSPVTKIMLSEKHLVSVCADNNHVRTWTVTRFRGMISTQPGSTPLASFKI 470
Query: 324 LALEPPTAH----PHNDCGPYGEQDVEQIFIQKVIPDTDTLYVRLASNGKRVCTIRSVDG 379
L+LE +H ND GP+GE+D +Q+FIQKV+P T+ L+VRL+S GKR+C I++VD
Sbjct: 471 LSLEETESHGSYSSGNDIGPFGERDDQQVFIQKVVPITNKLFVRLSSTGKRICEIQAVDC 530
Query: 380 SAVSCFTVAECEGA----LRPRRLLLCGHRSGAAQMWDLTAPIDRAVKPASSMPSGEGDE 435
+ +S FTV ECEG+ RPRR L GH +G+ QMWDLT +D K S + D
Sbjct: 531 TTISSFTVRECEGSSRMGSRPRRYLFTGHTNGSIQMWDLTTAMDMVNK------SEDKD- 583
Query: 436 SPSTEGGPTPDELVRLLSGCDLDAT 460
GGPT +EL++LL CDL +
Sbjct: 584 ----VGGPTEEELLKLLDQCDLSTS 604
Score = 35.5 bits (78), Expect = 0.41
Identities = 13/18 (72%), Positives = 15/18 (83%)
Query: 1 MTHSSCGDVLFYGYLPPP 18
+ SSCG VLF+GYLPPP
Sbjct: 115 LERSSCGSVLFHGYLPPP 132
>BC126173-1|AAI26174.1| 815|Homo sapiens potassium channel
tetramerisation domain containing 3 protein.
Length = 815
Score = 489 bits (1206), Expect = e-138
Identities = 249/445 (55%), Positives = 308/445 (69%), Gaps = 31/445 (6%)
Query: 24 DNSKVHIIKAHHNWVVVAYAHFVTGYRLTDSCGWYVVFQSPVQDSVIERIALNAKXXXXX 83
D KV I+ HHNW+V AYAHF YR+ +S GW VF SP D IER+ALNAK
Sbjct: 183 DPRKVLIVAGHHNWIVAAYAHFAVCYRIKESSGWQQVFTSPYLDWTIERVALNAKVVGGP 242
Query: 84 XXXXXXXXXXDVMLGIASGPLVKLWAFSTHSEPVRRTLIGSFNLGVRIEHLLFVGPQLVA 143
D M+ +AS + LW+ IG F+LGV ++ L F+G QLVA
Sbjct: 243 HGDK------DKMVAVASESSIILWSVQDGGSGSE---IGVFSLGVPVDALFFIGNQLVA 293
Query: 144 LSGAGSRSKAGVWHTSTQHWQTQDVAHLTTYDTAGSFLLLGTATGAINYIDMQKFPLRMK 203
S G K GVW+ TQHWQ QDV +T+YDTAGSFLLLG G+I YIDMQKFPLRMK
Sbjct: 294 TSHTG---KVGVWNAVTQHWQVQDVVPITSYDTAGSFLLLGCNNGSIYYIDMQKFPLRMK 350
Query: 204 DNDLLVTQLYKDPNLEPITAISVYLTPKTNLCGNWIEIAYGTRYGSVRVIVQHPETVGHG 263
DNDLLVT+LY DP+ + ITA+SVYLTPKT++ GNWIEIAYGT G+VRVIVQHPETVG G
Sbjct: 351 DNDLLVTELYHDPSNDAITALSVYLTPKTSVSGNWIEIAYGTSSGAVRVIVQHPETVGSG 410
Query: 264 PQLFQTFTVHQSPITKVSLSENYLISVCSEYNHVRSWRVTRFRGMISTQPGTTPNAAFKV 323
PQLFQTFTVH+SP+TK+ LSE +L+SVC++ NHVR+W VTRFRGMISTQPG+TP A+FK+
Sbjct: 411 PQLFQTFTVHRSPVTKIMLSEKHLVSVCADNNHVRTWTVTRFRGMISTQPGSTPLASFKI 470
Query: 324 LALEPPTAH----PHNDCGPYGEQDVEQIFIQKVIPDTDTLYVRLASNGKRVCTIRSVDG 379
L+LE +H ND GP+GE+D +Q+FIQKV+P T+ L+VRL+S GKR+C I++VD
Sbjct: 471 LSLEETESHGSYSSGNDIGPFGERDDQQVFIQKVVPITNKLFVRLSSTGKRICEIQAVDC 530
Query: 380 SAVSCFTVAECEGA----LRPRRLLLCGHRSGAAQMWDLTAPIDRAVKPASSMPSGEGDE 435
+ +S FTV ECEG+ RPRR L GH +G+ QMWDLT +D K S + D
Sbjct: 531 TTISSFTVRECEGSSRMGSRPRRYLFTGHTNGSIQMWDLTTAMDMVNK------SEDKD- 583
Query: 436 SPSTEGGPTPDELVRLLSGCDLDAT 460
GGPT +EL++LL CDL +
Sbjct: 584 ----VGGPTEEELLKLLDQCDLSTS 604
Score = 35.5 bits (78), Expect = 0.41
Identities = 13/18 (72%), Positives = 15/18 (83%)
Query: 1 MTHSSCGDVLFYGYLPPP 18
+ SSCG VLF+GYLPPP
Sbjct: 115 LERSSCGSVLFHGYLPPP 132
>BC117188-1|AAI17189.1| 815|Homo sapiens potassium channel
tetramerisation domain containing 3 protein.
Length = 815
Score = 489 bits (1206), Expect = e-138
Identities = 249/445 (55%), Positives = 308/445 (69%), Gaps = 31/445 (6%)
Query: 24 DNSKVHIIKAHHNWVVVAYAHFVTGYRLTDSCGWYVVFQSPVQDSVIERIALNAKXXXXX 83
D KV I+ HHNW+V AYAHF YR+ +S GW VF SP D IER+ALNAK
Sbjct: 183 DPRKVLIVAGHHNWIVAAYAHFAVCYRIKESSGWQQVFTSPYLDWTIERVALNAKVVGGP 242
Query: 84 XXXXXXXXXXDVMLGIASGPLVKLWAFSTHSEPVRRTLIGSFNLGVRIEHLLFVGPQLVA 143
D M+ +AS + LW+ IG F+LGV ++ L F+G QLVA
Sbjct: 243 HGDK------DKMVAVASESSIILWSVQDGGSGSE---IGVFSLGVPVDALFFIGNQLVA 293
Query: 144 LSGAGSRSKAGVWHTSTQHWQTQDVAHLTTYDTAGSFLLLGTATGAINYIDMQKFPLRMK 203
S G K GVW+ TQHWQ QDV +T+YDTAGSFLLLG G+I YIDMQKFPLRMK
Sbjct: 294 TSHTG---KVGVWNAVTQHWQVQDVVPITSYDTAGSFLLLGCNNGSIYYIDMQKFPLRMK 350
Query: 204 DNDLLVTQLYKDPNLEPITAISVYLTPKTNLCGNWIEIAYGTRYGSVRVIVQHPETVGHG 263
DNDLLVT+LY DP+ + ITA+SVYLTPKT++ GNWIEIAYGT G+VRVIVQHPETVG G
Sbjct: 351 DNDLLVTELYHDPSNDAITALSVYLTPKTSVSGNWIEIAYGTSSGAVRVIVQHPETVGSG 410
Query: 264 PQLFQTFTVHQSPITKVSLSENYLISVCSEYNHVRSWRVTRFRGMISTQPGTTPNAAFKV 323
PQLFQTFTVH+SP+TK+ LSE +L+SVC++ NHVR+W VTRFRGMISTQPG+TP A+FK+
Sbjct: 411 PQLFQTFTVHRSPVTKIMLSEKHLVSVCADNNHVRTWTVTRFRGMISTQPGSTPLASFKI 470
Query: 324 LALEPPTAH----PHNDCGPYGEQDVEQIFIQKVIPDTDTLYVRLASNGKRVCTIRSVDG 379
L+LE +H ND GP+GE+D +Q+FIQKV+P T+ L+VRL+S GKR+C I++VD
Sbjct: 471 LSLEETESHGSYSSGNDIGPFGERDDQQVFIQKVVPITNKLFVRLSSTGKRICEIQAVDC 530
Query: 380 SAVSCFTVAECEGA----LRPRRLLLCGHRSGAAQMWDLTAPIDRAVKPASSMPSGEGDE 435
+ +S FTV ECEG+ RPRR L GH +G+ QMWDLT +D K S + D
Sbjct: 531 TTISSFTVRECEGSSRMGSRPRRYLFTGHTNGSIQMWDLTTAMDMVNK------SEDKD- 583
Query: 436 SPSTEGGPTPDELVRLLSGCDLDAT 460
GGPT +EL++LL CDL +
Sbjct: 584 ----VGGPTEEELLKLLDQCDLSTS 604
Score = 35.5 bits (78), Expect = 0.41
Identities = 13/18 (72%), Positives = 15/18 (83%)
Query: 1 MTHSSCGDVLFYGYLPPP 18
+ SSCG VLF+GYLPPP
Sbjct: 115 LERSSCGSVLFHGYLPPP 132
>BC013868-1|AAH13868.1| 736|Homo sapiens KCTD3 protein protein.
Length = 736
Score = 489 bits (1206), Expect = e-138
Identities = 249/445 (55%), Positives = 308/445 (69%), Gaps = 31/445 (6%)
Query: 24 DNSKVHIIKAHHNWVVVAYAHFVTGYRLTDSCGWYVVFQSPVQDSVIERIALNAKXXXXX 83
D KV I+ HHNW+V AYAHF YR+ +S GW VF SP D IER+ALNAK
Sbjct: 183 DPRKVLIVAGHHNWIVAAYAHFAVCYRIKESSGWQQVFTSPYLDWTIERVALNAKVVGGP 242
Query: 84 XXXXXXXXXXDVMLGIASGPLVKLWAFSTHSEPVRRTLIGSFNLGVRIEHLLFVGPQLVA 143
D M+ +AS + LW+ IG F+LGV ++ L F+G QLVA
Sbjct: 243 HGDK------DKMVAVASESSIILWSVQDGGSGSE---IGVFSLGVPVDALFFIGNQLVA 293
Query: 144 LSGAGSRSKAGVWHTSTQHWQTQDVAHLTTYDTAGSFLLLGTATGAINYIDMQKFPLRMK 203
S G K GVW+ TQHWQ QDV +T+YDTAGSFLLLG G+I YIDMQKFPLRMK
Sbjct: 294 TSHTG---KVGVWNAVTQHWQVQDVVPITSYDTAGSFLLLGCNNGSIYYIDMQKFPLRMK 350
Query: 204 DNDLLVTQLYKDPNLEPITAISVYLTPKTNLCGNWIEIAYGTRYGSVRVIVQHPETVGHG 263
DNDLLVT+LY DP+ + ITA+SVYLTPKT++ GNWIEIAYGT G+VRVIVQHPETVG G
Sbjct: 351 DNDLLVTELYHDPSNDAITALSVYLTPKTSVSGNWIEIAYGTSSGAVRVIVQHPETVGSG 410
Query: 264 PQLFQTFTVHQSPITKVSLSENYLISVCSEYNHVRSWRVTRFRGMISTQPGTTPNAAFKV 323
PQLFQTFTVH+SP+TK+ LSE +L+SVC++ NHVR+W VTRFRGMISTQPG+TP A+FK+
Sbjct: 411 PQLFQTFTVHRSPVTKIMLSEKHLVSVCADNNHVRTWTVTRFRGMISTQPGSTPLASFKI 470
Query: 324 LALEPPTAH----PHNDCGPYGEQDVEQIFIQKVIPDTDTLYVRLASNGKRVCTIRSVDG 379
L+LE +H ND GP+GE+D +Q+FIQKV+P T+ L+VRL+S GKR+C I++VD
Sbjct: 471 LSLEETESHGSYSSGNDIGPFGERDDQQVFIQKVVPITNKLFVRLSSTGKRICEIQAVDC 530
Query: 380 SAVSCFTVAECEGA----LRPRRLLLCGHRSGAAQMWDLTAPIDRAVKPASSMPSGEGDE 435
+ +S FTV ECEG+ RPRR L GH +G+ QMWDLT +D K S + D
Sbjct: 531 TTISSFTVRECEGSSRMGSRPRRYLFTGHTNGSIQMWDLTTAMDMVNK------SEDKD- 583
Query: 436 SPSTEGGPTPDELVRLLSGCDLDAT 460
GGPT +EL++LL CDL +
Sbjct: 584 ----VGGPTEEELLKLLDQCDLSTS 604
Score = 35.5 bits (78), Expect = 0.41
Identities = 13/18 (72%), Positives = 15/18 (83%)
Query: 1 MTHSSCGDVLFYGYLPPP 18
+ SSCG VLF+GYLPPP
Sbjct: 115 LERSSCGSVLFHGYLPPP 132
>AL365315-1|CAD20310.1| 815|Homo sapiens potassium channel
tetramerisation domain containing 3 protein.
Length = 815
Score = 489 bits (1206), Expect = e-138
Identities = 249/445 (55%), Positives = 308/445 (69%), Gaps = 31/445 (6%)
Query: 24 DNSKVHIIKAHHNWVVVAYAHFVTGYRLTDSCGWYVVFQSPVQDSVIERIALNAKXXXXX 83
D KV I+ HHNW+V AYAHF YR+ +S GW VF SP D IER+ALNAK
Sbjct: 183 DPRKVLIVAGHHNWIVAAYAHFAVCYRIKESSGWQQVFTSPYLDWTIERVALNAKVVGGP 242
Query: 84 XXXXXXXXXXDVMLGIASGPLVKLWAFSTHSEPVRRTLIGSFNLGVRIEHLLFVGPQLVA 143
D M+ +AS + LW+ IG F+LGV ++ L F+G QLVA
Sbjct: 243 HGDK------DKMVAVASESSIILWSVQDGGSGSE---IGVFSLGVPVDALFFIGNQLVA 293
Query: 144 LSGAGSRSKAGVWHTSTQHWQTQDVAHLTTYDTAGSFLLLGTATGAINYIDMQKFPLRMK 203
S G K GVW+ TQHWQ QDV +T+YDTAGSFLLLG G+I YIDMQKFPLRMK
Sbjct: 294 TSHTG---KVGVWNAVTQHWQVQDVVPITSYDTAGSFLLLGCNNGSIYYIDMQKFPLRMK 350
Query: 204 DNDLLVTQLYKDPNLEPITAISVYLTPKTNLCGNWIEIAYGTRYGSVRVIVQHPETVGHG 263
DNDLLVT+LY DP+ + ITA+SVYLTPKT++ GNWIEIAYGT G+VRVIVQHPETVG G
Sbjct: 351 DNDLLVTELYHDPSNDAITALSVYLTPKTSVSGNWIEIAYGTSSGAVRVIVQHPETVGSG 410
Query: 264 PQLFQTFTVHQSPITKVSLSENYLISVCSEYNHVRSWRVTRFRGMISTQPGTTPNAAFKV 323
PQLFQTFTVH+SP+TK+ LSE +L+SVC++ NHVR+W VTRFRGMISTQPG+TP A+FK+
Sbjct: 411 PQLFQTFTVHRSPVTKIMLSEKHLVSVCADNNHVRTWTVTRFRGMISTQPGSTPLASFKI 470
Query: 324 LALEPPTAH----PHNDCGPYGEQDVEQIFIQKVIPDTDTLYVRLASNGKRVCTIRSVDG 379
L+LE +H ND GP+GE+D +Q+FIQKV+P T+ L+VRL+S GKR+C I++VD
Sbjct: 471 LSLEETESHGSYSSGNDIGPFGERDDQQVFIQKVVPITNKLFVRLSSTGKRICEIQAVDC 530
Query: 380 SAVSCFTVAECEGA----LRPRRLLLCGHRSGAAQMWDLTAPIDRAVKPASSMPSGEGDE 435
+ +S FTV ECEG+ RPRR L GH +G+ QMWDLT +D K S + D
Sbjct: 531 TTISSFTVRECEGSSRMGSRPRRYLFTGHTNGSIQMWDLTTAMDMVNK------SEDKD- 583
Query: 436 SPSTEGGPTPDELVRLLSGCDLDAT 460
GGPT +EL++LL CDL +
Sbjct: 584 ----VGGPTEEELLKLLDQCDLSTS 604
Score = 35.5 bits (78), Expect = 0.41
Identities = 13/18 (72%), Positives = 15/18 (83%)
Query: 1 MTHSSCGDVLFYGYLPPP 18
+ SSCG VLF+GYLPPP
Sbjct: 115 LERSSCGSVLFHGYLPPP 132
>BC094879-1|AAH94879.1| 813|Homo sapiens potassium channel
tetramerisation domain containing 3 protein.
Length = 813
Score = 488 bits (1204), Expect = e-137
Identities = 247/445 (55%), Positives = 306/445 (68%), Gaps = 33/445 (7%)
Query: 24 DNSKVHIIKAHHNWVVVAYAHFVTGYRLTDSCGWYVVFQSPVQDSVIERIALNAKXXXXX 83
D KV I+ HHNW+V AYAHF YR+ +S GW VF SP D IER+ALNAK
Sbjct: 183 DPRKVLIVAGHHNWIVAAYAHFAVCYRIKESSGWQQVFTSPYLDWTIERVALNAKVVGGP 242
Query: 84 XXXXXXXXXXDVMLGIASGPLVKLWAFSTHSEPVRRTLIGSFNLGVRIEHLLFVGPQLVA 143
D M+ +AS + LW+ IG F+LGV ++ L F+G QLVA
Sbjct: 243 HGDK------DKMVAVASESSIILWSVQDGGSGSE---IGVFSLGVPVDALFFIGNQLVA 293
Query: 144 LSGAGSRSKAGVWHTSTQHWQTQDVAHLTTYDTAGSFLLLGTATGAINYIDMQKFPLRMK 203
S G K GVW+ TQHWQ QDV +T+YDTAGSFLLLG G+I YIDMQKFPLRMK
Sbjct: 294 TSHTG---KVGVWNAVTQHWQVQDVVPITSYDTAGSFLLLGCNNGSIYYIDMQKFPLRMK 350
Query: 204 DNDLLVTQLYKDPNLEPITAISVYLTPKTNLCGNWIEIAYGTRYGSVRVIVQHPETVGHG 263
DNDLLVT+LY DP+ + ITA+SVYLTPKT++ GNWIEIAYGT G+VRVIVQHPETVG G
Sbjct: 351 DNDLLVTELYHDPSNDAITALSVYLTPKTSVSGNWIEIAYGTSSGAVRVIVQHPETVGSG 410
Query: 264 PQLFQTFTVHQSPITKVSLSENYLISVCSEYNHVRSWRVTRFRGMISTQPGTTPNAAFKV 323
PQLFQTFTVH+SP+TK+ LSE +L+SVC++ NHVR+W VTRFRGMISTQPG+TP A+FK+
Sbjct: 411 PQLFQTFTVHRSPVTKIMLSEKHLVSVCADNNHVRTWTVTRFRGMISTQPGSTPLASFKI 470
Query: 324 LALEPPTAH----PHNDCGPYGEQDVEQIFIQKVIPDTDTLYVRLASNGKRVCTIRSVDG 379
L+LE +H ND GP+GE+D +Q+FIQKV+P T+ L+VRL+S GKR+C I++VD
Sbjct: 471 LSLEETESHGSYSSGNDIGPFGERDDQQVFIQKVVPITNKLFVRLSSTGKRICEIQAVDC 530
Query: 380 SAVSCFTVAECEGA----LRPRRLLLCGHRSGAAQMWDLTAPIDRAVKPASSMPSGEGDE 435
+ +S FTV ECEG+ RPRR L GH +G+ QMWDLT +D K
Sbjct: 531 TTISSFTVRECEGSSRMGSRPRRYLFTGHTNGSIQMWDLTTAMDMVNK------------ 578
Query: 436 SPSTEGGPTPDELVRLLSGCDLDAT 460
+GGPT +EL++LL CDL +
Sbjct: 579 -SEDKGGPTEEELLKLLDQCDLSTS 602
Score = 35.5 bits (78), Expect = 0.41
Identities = 13/18 (72%), Positives = 15/18 (83%)
Query: 1 MTHSSCGDVLFYGYLPPP 18
+ SSCG VLF+GYLPPP
Sbjct: 115 LERSSCGSVLFHGYLPPP 132
>AF258553-1|AAG23756.1| 707|Homo sapiens PP203 protein.
Length = 707
Score = 466 bits (1148), Expect = e-131
Identities = 242/460 (52%), Positives = 305/460 (66%), Gaps = 35/460 (7%)
Query: 16 PPPLNTWPDNSKVHIIKAHHNWVVVAYAHFVTGYRLTDSCGWYVVFQSPVQDSVIERIAL 75
P P + V ++ HHNW+ VAY F+ YRL ++ GW +VF SP D IER+AL
Sbjct: 184 PSPSGQPEEPGMVRLVCGHHNWIAVAYTQFLVCYRLKEASGWQLVFSSPRLDWPIERLAL 243
Query: 76 NAKXXXXXXXXXXXXXXXDVMLGIASGPLVKLWAFSTHSEPVRRTLIGSFNLGVRIEHLL 135
A+ D M+ A+G + LWA IG F+LGV +E L
Sbjct: 244 TARVHGGALGEH------DKMVAAATGSEILLWALQAEGGGSE---IGVFHLGVPVEALF 294
Query: 136 FVGPQLVALSGAGSRSKAGVWHTSTQHWQTQDVAHLTTYDTAGSFLLLGTATGAINYIDM 195
FVG QL+A S G + GVW+ T+HWQ Q+V +T+YD AGSFLLLG G+I Y+D+
Sbjct: 295 FVGNQLIATSHTG---RIGVWNAVTKHWQVQEVQPITSYDAAGSFLLLGCNNGSIYYVDV 351
Query: 196 QKFPLRMKDNDLLVTQLYKDPNLEPITAISVYLTPKTNLCGNWIEIAYGTRYGSVRVIVQ 255
QKFPLRMKDNDLLV++LY+DP + +TA+SVYLTPKT+ GNWIEIAYGT G VRVIVQ
Sbjct: 352 QKFPLRMKDNDLLVSELYRDPAEDGVTALSVYLTPKTSDSGNWIEIAYGTSSGGVRVIVQ 411
Query: 256 HPETVGHGPQLFQTFTVHQSPITKVSLSENYLISVCSEYNHVRSWRVTRFRGMISTQPGT 315
HPETVG GPQLFQTFTVH+SP+TK+ LSE +LISVC++ NHVR+W VTRFRGMISTQPG+
Sbjct: 412 HPETVGSGPQLFQTFTVHRSPVTKIMLSEKHLISVCADNNHVRTWSVTRFRGMISTQPGS 471
Query: 316 TPNAAFKVLALEPPTAH----PHNDCGPYGEQDVEQIFIQKVIPDTDTLYVRLASNGKRV 371
TP A+FK+LALE H ND GPYGE+D +Q+FIQKV+P L+VRL+S G+RV
Sbjct: 472 TPLASFKILALESADGHGGCSAGNDIGPYGERDDQQVFIQKVVPSASQLFVRLSSTGQRV 531
Query: 372 CTIRSVDGSAVSCFTVAECEGA----LRPRRLLLCGHRSGAAQMWDLTAPIDRAVKPASS 427
C++RSVDGS + FTV ECEG+ RPRR LL G +G+ MWDLT +D
Sbjct: 532 CSVRSVDGSPTTAFTVLECEGSRRLGSRPRRYLLTGQANGSLAMWDLTTAMD-------- 583
Query: 428 MPSGEGDESPSTEGGPTPDELVRLLSGCDLDATPVPQSPN 467
G G ++P+ GG T EL+ L C+L A P P +P+
Sbjct: 584 ---GLG-QAPA--GGLTEQELMEQLEHCEL-APPAPSAPS 616
Score = 34.7 bits (76), Expect = 0.71
Identities = 13/19 (68%), Positives = 16/19 (84%)
Query: 1 MTHSSCGDVLFYGYLPPPL 19
+ SSCG+VLF GYLPPP+
Sbjct: 116 LDRSSCGNVLFNGYLPPPV 134
>BC022855-1|AAH22855.1| 707|Homo sapiens SH3KBP1 binding protein 1
protein.
Length = 707
Score = 463 bits (1141), Expect = e-130
Identities = 241/460 (52%), Positives = 304/460 (66%), Gaps = 35/460 (7%)
Query: 16 PPPLNTWPDNSKVHIIKAHHNWVVVAYAHFVTGYRLTDSCGWYVVFQSPVQDSVIERIAL 75
P P + V ++ HHNW+ VAY F+ YRL ++ GW +VF SP D IER+AL
Sbjct: 184 PSPSGQPEEPGMVRLVCGHHNWIAVAYTQFLVCYRLKEASGWQLVFSSPRLDWPIERLAL 243
Query: 76 NAKXXXXXXXXXXXXXXXDVMLGIASGPLVKLWAFSTHSEPVRRTLIGSFNLGVRIEHLL 135
A+ D M+ A+G + LWA IG F+LGV +E L
Sbjct: 244 TARVHGGALGEH------DKMVAAATGSEILLWALQAEGGGSE---IGVFHLGVPVEALF 294
Query: 136 FVGPQLVALSGAGSRSKAGVWHTSTQHWQTQDVAHLTTYDTAGSFLLLGTATGAINYIDM 195
FVG QL+A S G + GVW+ T+HWQ Q+V +T+YD AGSFLLLG G+I Y+D+
Sbjct: 295 FVGNQLIATSHTG---RIGVWNAVTKHWQVQEVQPITSYDAAGSFLLLGCNNGSIYYVDV 351
Query: 196 QKFPLRMKDNDLLVTQLYKDPNLEPITAISVYLTPKTNLCGNWIEIAYGTRYGSVRVIVQ 255
QKFPLRMKDNDLLV++LY+DP + +TA+SVYLTPKT+ GNWIEIAYGT G VRVIVQ
Sbjct: 352 QKFPLRMKDNDLLVSELYRDPAEDGVTALSVYLTPKTSDSGNWIEIAYGTSSGGVRVIVQ 411
Query: 256 HPETVGHGPQLFQTFTVHQSPITKVSLSENYLISVCSEYNHVRSWRVTRFRGMISTQPGT 315
HPETVG GPQLFQTFTVH+SP+TK+ LSE +LISVC++ NHVR+W VTRFRGMISTQPG+
Sbjct: 412 HPETVGSGPQLFQTFTVHRSPVTKIMLSEKHLISVCADNNHVRTWSVTRFRGMISTQPGS 471
Query: 316 TPNAAFKVLALEPPTAH----PHNDCGPYGEQDVEQIFIQKVIPDTDTLYVRLASNGKRV 371
TP A+FK+LALE H ND GPYGE+D + +FIQKV+P L+VRL+S G+RV
Sbjct: 472 TPLASFKILALESADGHGGCSAGNDIGPYGERDDQLVFIQKVVPSASQLFVRLSSTGQRV 531
Query: 372 CTIRSVDGSAVSCFTVAECEGA----LRPRRLLLCGHRSGAAQMWDLTAPIDRAVKPASS 427
C++RSVDGS + FTV ECEG+ RPRR LL G +G+ MWDLT +D
Sbjct: 532 CSVRSVDGSPTTAFTVLECEGSRRLGSRPRRYLLTGQANGSLAMWDLTTAMD-------- 583
Query: 428 MPSGEGDESPSTEGGPTPDELVRLLSGCDLDATPVPQSPN 467
G G ++P+ GG T EL+ L C+L A P P +P+
Sbjct: 584 ---GLG-QAPA--GGLTEQELMEQLEHCEL-APPAPSAPS 616
Score = 34.7 bits (76), Expect = 0.71
Identities = 13/19 (68%), Positives = 16/19 (84%)
Query: 1 MTHSSCGDVLFYGYLPPPL 19
+ SSCG+VLF GYLPPP+
Sbjct: 116 LDRSSCGNVLFNGYLPPPV 134
>BC007653-1|AAH07653.1| 485|Homo sapiens SHKBP1 protein protein.
Length = 485
Score = 433 bits (1066), Expect = e-121
Identities = 228/420 (54%), Positives = 284/420 (67%), Gaps = 35/420 (8%)
Query: 56 GWYVVFQSPVQDSVIERIALNAKXXXXXXXXXXXXXXXDVMLGIASGPLVKLWAFSTHSE 115
GW +VF SP D IER+AL A+ D M+ A+G + LWA
Sbjct: 2 GWQLVFSSPRLDWPIERLALTARVHGGALGEH------DKMVAAATGSEILLWALQAEGG 55
Query: 116 PVRRTLIGSFNLGVRIEHLLFVGPQLVALSGAGSRSKAGVWHTSTQHWQTQDVAHLTTYD 175
IG F+LGV +E L FVG QL+A S G + GVW+ T+HWQ Q+V +T+YD
Sbjct: 56 GSE---IGVFHLGVPVEALFFVGNQLIATSHTG---RIGVWNAVTKHWQVQEVQPITSYD 109
Query: 176 TAGSFLLLGTATGAINYIDMQKFPLRMKDNDLLVTQLYKDPNLEPITAISVYLTPKTNLC 235
AGSFLLLG G+I Y+D+QKFPLRMKDNDLLV++LY+DP + +TA+SVYLTPKT+
Sbjct: 110 AAGSFLLLGCNNGSIYYVDVQKFPLRMKDNDLLVSELYRDPAEDGVTALSVYLTPKTSDS 169
Query: 236 GNWIEIAYGTRYGSVRVIVQHPETVGHGPQLFQTFTVHQSPITKVSLSENYLISVCSEYN 295
GNWIEIAYGT G VRVIVQHPETVG GPQLFQTFTVH+SP+TK+ LSE +LISVC++ N
Sbjct: 170 GNWIEIAYGTSSGGVRVIVQHPETVGSGPQLFQTFTVHRSPVTKIMLSEKHLISVCADNN 229
Query: 296 HVRSWRVTRFRGMISTQPGTTPNAAFKVLALEPPTAH----PHNDCGPYGEQDVEQIFIQ 351
HVR+W VTRFRGMISTQPG+TP A+FK+LALE H ND GPYGE+D +Q+FIQ
Sbjct: 230 HVRTWSVTRFRGMISTQPGSTPLASFKILALESADGHGGCSAGNDIGPYGERDDQQVFIQ 289
Query: 352 KVIPDTDTLYVRLASNGKRVCTIRSVDGSAVSCFTVAECEGA----LRPRRLLLCGHRSG 407
KV+P L+VRL+S G+RVC++RSVDGS + FTV ECEG+ RPRR LL G +G
Sbjct: 290 KVVPSASQLFVRLSSTGQRVCSVRSVDGSPTTAFTVLECEGSRRLGSRPRRYLLTGQANG 349
Query: 408 AAQMWDLTAPIDRAVKPASSMPSGEGDESPSTEGGPTPDELVRLLSGCDLDATPVPQSPN 467
+ MWDLT +D G G ++P+ GG T EL+ L C+L A P P +P+
Sbjct: 350 SLAMWDLTTAMD-----------GLG-QAPA--GGLTEQELMEQLEHCEL-APPAPSAPS 394
>AL365315-3|CAH71927.1| 167|Homo sapiens potassium channel
tetramerisation domain containing 3 protein.
Length = 167
Score = 231 bits (566), Expect = 3e-60
Identities = 106/163 (65%), Positives = 134/163 (82%), Gaps = 4/163 (2%)
Query: 223 AISVYLTPKTNLCGNWIEIAYGTRYGSVRVIVQHPETVGHGPQLFQTFTVHQSPITKVSL 282
A+SVYLTPKT++ GNWIEIAYGT G+VRVIVQHPETVG GPQLFQTFTVH+SP+TK+ L
Sbjct: 1 ALSVYLTPKTSVSGNWIEIAYGTSSGAVRVIVQHPETVGSGPQLFQTFTVHRSPVTKIML 60
Query: 283 SENYLISVCSEYNHVRSWRVTRFRGMISTQPGTTPNAAFKVLALEPPTAH----PHNDCG 338
SE +L+SVC++ NHVR+W VTRFRGMISTQPG+TP A+FK+L+LE +H ND G
Sbjct: 61 SEKHLVSVCADNNHVRTWTVTRFRGMISTQPGSTPLASFKILSLEETESHGSYSSGNDIG 120
Query: 339 PYGEQDVEQIFIQKVIPDTDTLYVRLASNGKRVCTIRSVDGSA 381
P+GE+D +Q+FIQKV+P T+ L+VRL+S GK +C + V S+
Sbjct: 121 PFGERDDQQVFIQKVVPITNKLFVRLSSTGKSLCGVSLVSRSS 163
>AK075057-1|BAC11374.1| 305|Homo sapiens protein ( Homo sapiens
cDNA FLJ90576 fis, clone OVARC1001991, weakly similar to
VOLTAGE-GATED POTASSIUM CHANNEL PROTEIN KV3.3. ).
Length = 305
Score = 67.7 bits (158), Expect = 8e-11
Identities = 41/124 (33%), Positives = 57/124 (45%), Gaps = 10/124 (8%)
Query: 16 PPPLNTWPDNSKVHIIKAHHNWVVVAYAHFVTGYRLTDSCGWYVVFQSPVQDSVIERIAL 75
P P + V ++ HHNW+ VAY F+ YRL ++ GW +VF SP D IER+AL
Sbjct: 184 PSPSGQPEEPGMVRLVCGHHNWIAVAYTQFLVCYRLKEASGWQLVFSSPRLDWPIERLAL 243
Query: 76 NAKXXXXXXXXXXXXXXXDVMLGIASGPLVKLWAFSTHSEPVRRTLIGSFNLGVRIEHLL 135
A+ D M+ A+G + LWA + IG+ + GV H
Sbjct: 244 TAR------VHGGALGEHDKMVAAATGSEILLWALQAEG---GGSEIGA-HRGVECRHQA 293
Query: 136 FVGP 139
GP
Sbjct: 294 LAGP 297
Score = 34.7 bits (76), Expect = 0.71
Identities = 13/19 (68%), Positives = 16/19 (84%)
Query: 1 MTHSSCGDVLFYGYLPPPL 19
+ SSCG+VLF GYLPPP+
Sbjct: 116 LDRSSCGNVLFNGYLPPPV 134
>AL365315-2|CAH71926.1| 212|Homo sapiens potassium channel
tetramerisation domain containing 3 protein.
Length = 212
Score = 41.9 bits (94), Expect = 0.005
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 24 DNSKVHIIKAHHNWVVVAYAHFVTGYRL 51
D KV I+ HHNW+V AYAHF YR+
Sbjct: 155 DPRKVLIVAGHHNWIVAAYAHFAVCYRV 182
Score = 35.5 bits (78), Expect = 0.41
Identities = 13/18 (72%), Positives = 15/18 (83%)
Query: 1 MTHSSCGDVLFYGYLPPP 18
+ SSCG VLF+GYLPPP
Sbjct: 87 LERSSCGSVLFHGYLPPP 104
>CR533508-1|CAG38539.1| 473|Homo sapiens MGC8407 protein.
Length = 473
Score = 34.3 bits (75), Expect = 0.94
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 413 DLTAPIDRAVKPA---SSMPSGEGDESPSTEGGPTPDELVRLLSGCDLDATPVPQSPNRP 469
D AP DR+ PA S+ P+ +G +P+T+G TP + D ATP P
Sbjct: 349 DNVAPADRSATPATDGSATPATDGSVTPATDGSITPATDGSVTPATDRSATPATDGRATP 408
>BC019256-1|AAH19256.1| 501|Homo sapiens CaM kinase-like
vesicle-associated protein.
Length = 501
Score = 34.3 bits (75), Expect = 0.94
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 413 DLTAPIDRAVKPA---SSMPSGEGDESPSTEGGPTPDELVRLLSGCDLDATPVPQSPNRP 469
D AP DR+ PA S+ P+ +G +P+T+G TP + D ATP P
Sbjct: 377 DNVAPADRSATPATDGSATPATDGSVTPATDGSITPATDGSVTPATDRSATPATDGRATP 436
>BC017363-1|AAH17363.1| 501|Homo sapiens CaM kinase-like
vesicle-associated protein.
Length = 501
Score = 34.3 bits (75), Expect = 0.94
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 413 DLTAPIDRAVKPA---SSMPSGEGDESPSTEGGPTPDELVRLLSGCDLDATPVPQSPNRP 469
D AP DR+ PA S+ P+ +G +P+T+G TP + D ATP P
Sbjct: 377 DNVAPADRSATPATDGSATPATDGSVTPATDGSITPATDGSVTPATDRSATPATDGRATP 436
>BC005828-1|AAH05828.1| 501|Homo sapiens CaM kinase-like
vesicle-associated protein.
Length = 501
Score = 34.3 bits (75), Expect = 0.94
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 413 DLTAPIDRAVKPA---SSMPSGEGDESPSTEGGPTPDELVRLLSGCDLDATPVPQSPNRP 469
D AP DR+ PA S+ P+ +G +P+T+G TP + D ATP P
Sbjct: 377 DNVAPADRSATPATDGSATPATDGSVTPATDGSITPATDGSVTPATDRSATPATDGRATP 436
>BC001921-1|AAH01921.1| 501|Homo sapiens CaM kinase-like
vesicle-associated protein.
Length = 501
Score = 34.3 bits (75), Expect = 0.94
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 413 DLTAPIDRAVKPA---SSMPSGEGDESPSTEGGPTPDELVRLLSGCDLDATPVPQSPNRP 469
D AP DR+ PA S+ P+ +G +P+T+G TP + D ATP P
Sbjct: 377 DNVAPADRSATPATDGSATPATDGSVTPATDGSITPATDGSVTPATDRSATPATDGRATP 436
>BC000497-1|AAH00497.1| 501|Homo sapiens CaM kinase-like
vesicle-associated protein.
Length = 501
Score = 34.3 bits (75), Expect = 0.94
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 413 DLTAPIDRAVKPA---SSMPSGEGDESPSTEGGPTPDELVRLLSGCDLDATPVPQSPNRP 469
D AP DR+ PA S+ P+ +G +P+T+G TP + D ATP P
Sbjct: 377 DNVAPADRSATPATDGSATPATDGSVTPATDGSITPATDGSVTPATDRSATPATDGRATP 436
>AK074856-1|BAC11248.1| 501|Homo sapiens protein ( Homo sapiens
cDNA FLJ90375 fis, clone NT2RP2004670, highly similar to
Rattus norvegicus vesicla-associate calmodulin-binding
protein ).
Length = 501
Score = 34.3 bits (75), Expect = 0.94
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 413 DLTAPIDRAVKPA---SSMPSGEGDESPSTEGGPTPDELVRLLSGCDLDATPVPQSPNRP 469
D AP DR+ PA S+ P+ +G +P+T+G TP + D ATP P
Sbjct: 377 DNVAPADRSATPATDGSATPATDGSVTPATDGSITPATDGSVTPATDRSATPATDGRATP 436
>Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein.
Length = 3851
Score = 32.3 bits (70), Expect = 3.8
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 409 AQMWDLTAPIDRAVKPASSMPSGEGDESPSTEGGPTP 445
A++ + P R PA+S P+G+ PST GP P
Sbjct: 3722 ARLQQQSQPTTRGSAPAASQPAGKPQPGPSTATGPQP 3758
>AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc finger
protein protein.
Length = 3926
Score = 32.3 bits (70), Expect = 3.8
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 409 AQMWDLTAPIDRAVKPASSMPSGEGDESPSTEGGPTP 445
A++ + P R PA+S P+G+ PST GP P
Sbjct: 3797 ARLQQQSQPTTRGSAPAASQPAGKPQPGPSTATGPQP 3833
>AB007894-1|BAA23707.1| 1571|Homo sapiens KIAA0434 protein.
Length = 1571
Score = 32.3 bits (70), Expect = 3.8
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 409 AQMWDLTAPIDRAVKPASSMPSGEGDESPSTEGGPTP 445
A++ + P R PA+S P+G+ PST GP P
Sbjct: 1442 ARLQQQSQPTTRGSAPAASQPAGKPQPGPSTATGPQP 1478
>U29607-1|AAA82930.1| 478|Homo sapiens methionine aminopeptidase
protein.
Length = 478
Score = 31.9 bits (69), Expect = 5.0
Identities = 18/52 (34%), Positives = 24/52 (46%)
Query: 407 GAAQMWDLTAPIDRAVKPASSMPSGEGDESPSTEGGPTPDELVRLLSGCDLD 458
GAA + A R K S PS G++ P E G + DE+ R L L+
Sbjct: 26 GAASTAEEAAKKKRRKKKKSKGPSAAGEQEPDKESGASVDEVARQLERSALE 77
>U13261-1|AAC63402.1| 478|Homo sapiens eIF-2-associated p67 homolog
protein.
Length = 478
Score = 31.9 bits (69), Expect = 5.0
Identities = 18/52 (34%), Positives = 24/52 (46%)
Query: 407 GAAQMWDLTAPIDRAVKPASSMPSGEGDESPSTEGGPTPDELVRLLSGCDLD 458
GAA + A R K S PS G++ P E G + DE+ R L L+
Sbjct: 26 GAASTAEEAAKKKRRKKKKSKGPSAAGEQEPDKESGASVDEVARQLERSALE 77
>BC013782-1|AAH13782.1| 478|Homo sapiens methionyl aminopeptidase 2
protein.
Length = 478
Score = 31.9 bits (69), Expect = 5.0
Identities = 18/52 (34%), Positives = 24/52 (46%)
Query: 407 GAAQMWDLTAPIDRAVKPASSMPSGEGDESPSTEGGPTPDELVRLLSGCDLD 458
GAA + A R K S PS G++ P E G + DE+ R L L+
Sbjct: 26 GAASTAEEAAKKKRRKKKKSKGPSAAGEQEPDKESGASVDEVARQLERSALE 77
>BC015360-1|AAH15360.1| 281|Homo sapiens Unknown (protein for
IMAGE:3854916) protein.
Length = 281
Score = 31.1 bits (67), Expect = 8.8
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 251 RVIVQHPETVGHGPQLFQTFTVHQSPITKVSLS------ENYLISVCSEYNHVRSWRVTR 304
RV+ P VG+G + +H + K+ S E YLI +C E+N +W + +
Sbjct: 49 RVLQAPPPDVGNGEVPKELVELHLKLMRKIGKSVTADRWEKYLIKICQEFNSTWAWEMEK 108
>AF380176-1|AAK57515.1| 1431|Homo sapiens HBV pX associated protein
8 large isoform protein.
Length = 1431
Score = 31.1 bits (67), Expect = 8.8
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 251 RVIVQHPETVGHGPQLFQTFTVHQSPITKVSLS------ENYLISVCSEYNHVRSWRVTR 304
RV+ P VG+G + +H + K+ S E YLI +C E+N +W + +
Sbjct: 39 RVLQAPPPDVGNGEVPKELVELHLKLMRKIGKSVTADRWEKYLIKICQEFNSTWAWEMEK 98
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.319 0.135 0.425
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,769,552
Number of Sequences: 224733
Number of extensions: 3426139
Number of successful extensions: 7112
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 7009
Number of HSP's gapped (non-prelim): 62
length of query: 473
length of database: 73,234,838
effective HSP length: 93
effective length of query: 380
effective length of database: 52,334,669
effective search space: 19887174220
effective search space used: 19887174220
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 67 (31.1 bits)
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