GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004986-TA|BGIBMGA004986-PA|IPR008930|Terpenoid
cylases/protein prenyltransferase alpha-alpha toroid,
IPR001330|Prenyltransferase/squalene oxidase
         (405 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      27   0.38 
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               25   1.2  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   4.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   4.7  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   6.2  

>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 26.6 bits (56), Expect = 0.38
 Identities = 9/25 (36%), Positives = 16/25 (64%)

Query: 365 VVGSPSNELNRVHPLHNVAPHLVYN 389
           V+  P  +L ++ P++ V PHL +N
Sbjct: 146 VIHRPDTKLMKLPPMYEVMPHLYFN 170


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 9/34 (26%), Positives = 20/34 (58%)

Query: 50  DPDLPLLIKEVHSKLLKKCLINLPKSYECLDASR 83
           D D+ + +K+   K++++C+ N     +CL A +
Sbjct: 83  DTDMDMDLKDSIRKIIRQCVDNAKNEDKCLTAQK 116


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 3/29 (10%)

Query: 57  IKEVHSKLLKKCLINLPKSYE---CLDAS 82
           ++E     L++CL++L K+YE   CL AS
Sbjct: 427 LRESFIGTLQRCLLSLEKTYERDTCLLAS 455


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 3/29 (10%)

Query: 57  IKEVHSKLLKKCLINLPKSYE---CLDAS 82
           ++E     L++CL++L K+YE   CL AS
Sbjct: 465 LRESFIGTLQRCLLSLEKTYERDTCLLAS 493


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 326 NRDGGLIDKPGKPRDIYHTC 345
           N +  L+  PGK  +IY+ C
Sbjct: 194 NGEWDLLGVPGKRNEIYYNC 213


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.138    0.432 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,518
Number of Sequences: 429
Number of extensions: 5294
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 5
length of query: 405
length of database: 140,377
effective HSP length: 59
effective length of query: 346
effective length of database: 115,066
effective search space: 39812836
effective search space used: 39812836
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)