GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004973-TA|BGIBMGA004973-PA|undefined
         (186 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    25   0.59 
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    25   0.59 

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 24.6 bits (51), Expect = 0.59
 Identities = 15/61 (24%), Positives = 26/61 (42%)

Query: 50  DNRLNYEQALASVARLNYELEQSVTGSGKLHYADQNRLAYDPAVDTMCADPPYLLQAIKK 109
           D+ + Y    A+V RLN    + +   G++ +       YD  +  + A P   LQ +  
Sbjct: 44  DDEITYNIISAAVNRLNIPANEILELFGRMFFEFCQDSGYDKILQVLGATPRDFLQNLDA 103

Query: 110 L 110
           L
Sbjct: 104 L 104


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 24.6 bits (51), Expect = 0.59
 Identities = 15/61 (24%), Positives = 26/61 (42%)

Query: 50  DNRLNYEQALASVARLNYELEQSVTGSGKLHYADQNRLAYDPAVDTMCADPPYLLQAIKK 109
           D+ + Y    A+V RLN    + +   G++ +       YD  +  + A P   LQ +  
Sbjct: 44  DDEITYNIISAAVNRLNIPANEILELFGRMFFEFCQDSGYDKILQVLGATPRDFLQNLDA 103

Query: 110 L 110
           L
Sbjct: 104 L 104


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.135    0.396 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,459
Number of Sequences: 429
Number of extensions: 1975
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 186
length of database: 140,377
effective HSP length: 54
effective length of query: 132
effective length of database: 117,211
effective search space: 15471852
effective search space used: 15471852
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 41 (20.6 bits)