GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004971-TA|BGIBMGA004971-PA|IPR009976|Exocyst complex
component Sec10
         (738 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.           26   1.3  
AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           24   5.1  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           24   5.1  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    24   5.1  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    24   5.1  

>AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.
          Length = 126

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 10/22 (45%), Positives = 16/22 (72%)

Query: 147 VIVDLFSDPNKLNEAADVIQKL 168
           V+V L+ DP +  +AA V++KL
Sbjct: 96  VVVSLYEDPIQPQQAASVVEKL 117


>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 8/17 (47%), Positives = 13/17 (76%)

Query: 585 CLAVVSYLNSVMDKIHD 601
           C  V++ LN+V+D +HD
Sbjct: 86  CAGVITALNNVIDFLHD 102


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 8/17 (47%), Positives = 13/17 (76%)

Query: 585 CLAVVSYLNSVMDKIHD 601
           C  V++ LN+V+D +HD
Sbjct: 86  CAGVITALNNVIDFLHD 102


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 507 FEEHFQESILPCISSSSKQTECLHKKTAIMDQLESK--LDAGLER 549
           F E   E I  C+S ++ + EC+  +  I   LE    LD  LE+
Sbjct: 88  FTEDVHEIIEQCVSKAADEDECMVARKYIDCALEKMKFLDDELEK 132


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 507 FEEHFQESILPCISSSSKQTECLHKKTAIMDQLESK--LDAGLER 549
           F E   E I  C+S ++ + EC+  +  I   LE    LD  LE+
Sbjct: 88  FTEDVHEIIEQCVSKAADEDECMVARKYIDCALEKMKFLDDELEK 132


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.134    0.388 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,686
Number of Sequences: 429
Number of extensions: 7776
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 5
length of query: 738
length of database: 140,377
effective HSP length: 63
effective length of query: 675
effective length of database: 113,350
effective search space: 76511250
effective search space used: 76511250
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 47 (23.0 bits)