GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004965-TA|BGIBMGA004965-PA|IPR002213|UDP-
glucuronosyl/UDP-glucosyltransferase, IPR001014|Ribosomal L23 protein
         (525 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    26   0.88 
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    26   0.88 
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    24   3.6  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 25.8 bits (54), Expect = 0.88
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 336 DNVITDVWFPQQQLLAHKNVRAFITHGGPRS 366
           D +  ++W PQ+  L HK   +   +GGPR+
Sbjct: 125 DCLYLNIWVPQKYRLRHKGDGSPGGNGGPRN 155


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 25.8 bits (54), Expect = 0.88
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 336 DNVITDVWFPQQQLLAHKNVRAFITHGGPRS 366
           D +  ++W PQ+  L HK   +   +GGPR+
Sbjct: 125 DCLYLNIWVPQKYRLRHKGDGSPGGNGGPRN 155


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)

Query: 393 LTKYGAGEILDPL-HIDKQTLKQVISTVA 420
           L +Y A  I DP+ +  K+TLK+V++T+A
Sbjct: 132 LDRYWA--ITDPINYAQKRTLKRVLATIA 158


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.140    0.418 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,294
Number of Sequences: 429
Number of extensions: 6314
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 3
length of query: 525
length of database: 140,377
effective HSP length: 61
effective length of query: 464
effective length of database: 114,208
effective search space: 52992512
effective search space used: 52992512
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 46 (22.6 bits)