Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004947-TA|BGIBMGA004947-PA|IPR001680|WD-40 repeat,
IPR011048|Cytochrome cd1-nitrite reductase-like, C-terminal haem d1
(527 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 29 0.095
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 29 0.13
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 29 0.13
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 29 0.13
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 28 0.17
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 27 0.38
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 27 0.38
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 27 0.51
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 26 0.88
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 25 1.2
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 25 1.2
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 25 1.2
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 25 1.2
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 25 1.2
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 25 1.2
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 25 1.2
AY569719-1|AAS86672.1| 401|Apis mellifera complementary sex det... 25 1.2
AY569718-1|AAS86671.1| 401|Apis mellifera complementary sex det... 25 1.2
AY569715-1|AAS86668.1| 401|Apis mellifera complementary sex det... 25 1.2
AY569714-1|AAS86667.1| 401|Apis mellifera complementary sex det... 25 1.2
AY569713-1|AAS86666.1| 401|Apis mellifera complementary sex det... 25 1.2
AY569711-1|AAS86664.1| 401|Apis mellifera complementary sex det... 25 1.2
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 25 1.2
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 25 1.2
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 24 3.6
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 6.2
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 23 8.2
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 8.2
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 8.2
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 29.1 bits (62), Expect = 0.095
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 363 KEILSRKTSQHLPRKHKQFEYKPQKNKEETDYKTSANQNKEEIEPLQEQRKAHEHK 418
K++L +TS+ + ++ E K KN E Y+ +KE +E+ ++ EH+
Sbjct: 260 KKLLEERTSRKRYSRSREREQKSYKN--ENSYRKYRETSKERSRDRRERGRSREHR 313
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 28.7 bits (61), Expect = 0.13
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 363 KEILSRKTSQHLPRKHKQFEYKPQKNKEETDYKTSANQNKEEIEPLQEQRKAHEHK 418
+++L +TS+ + ++ E KN+ E Y+ +KE +E+ K+ EHK
Sbjct: 27 EKLLEERTSRKRYSRSREREQNSYKNERE--YRKYRETSKERSRDRKEREKSKEHK 80
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 28.7 bits (61), Expect = 0.13
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 363 KEILSRKTSQHLPRKHKQFEYKPQKNKEETDYKTSANQNKEEIEPLQEQRKAHEHK 418
+++L +TS+ + ++ E KN+ E Y+ +KE +E+ K+ EHK
Sbjct: 27 EKLLEERTSRKRYSRSREREQNSYKNERE--YRKYRETSKERSRDRKEREKSKEHK 80
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 28.7 bits (61), Expect = 0.13
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 363 KEILSRKTSQHLPRKHKQFEYKPQKNKEETDYKTSANQNKEEIEPLQEQRKAHEHK 418
+++L +TS+ + ++ E KN+ E Y+ +KE +E+ K+ EHK
Sbjct: 27 EKLLEERTSRKRYSRSREREQNSYKNERE--YRKYRETSKERSRDRKEREKSKEHK 80
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 28.3 bits (60), Expect = 0.17
Identities = 12/54 (22%), Positives = 28/54 (51%)
Query: 367 SRKTSQHLPRKHKQFEYKPQKNKEETDYKTSANQNKEEIEPLQEQRKAHEHKSY 420
S+KT Q P++ +Q + + Q ++ + Q +++ + Q+Q+ + K Y
Sbjct: 1497 SQKTQQQQPQQQQQQQQQQQPQQQSQQPQQQQPQPQQQQQQQQQQQPQQQQKEY 1550
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 27.1 bits (57), Expect = 0.38
Identities = 14/71 (19%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 363 KEILSRKTSQHLPRKHKQFEYKPQKNKEETDYKTSANQNKEEIEPLQEQRKAHEHKSYAD 422
+++L +TS+ + ++ E KN++E Y+ ++KE +E+ ++ E K +
Sbjct: 27 EKLLEERTSRKRYSRSREREQNSYKNEKE--YRKYRERSKERSRDKRERERSKERKIISS 84
Query: 423 TVRSQVWDVRN 433
+ + ++ N
Sbjct: 85 LSNNYISNISN 95
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 27.1 bits (57), Expect = 0.38
Identities = 14/71 (19%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 363 KEILSRKTSQHLPRKHKQFEYKPQKNKEETDYKTSANQNKEEIEPLQEQRKAHEHKSYAD 422
+++L +TS+ + ++ E KN++E Y+ ++KE +E+ ++ E K +
Sbjct: 27 EKLLEERTSRKRYSRSREREQNSYKNEKE--YRKYRERSKERSRDKRERERSKERKIISS 84
Query: 423 TVRSQVWDVRN 433
+ + ++ N
Sbjct: 85 LSNNYISNISN 95
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 26.6 bits (56), Expect = 0.51
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 382 EYKPQKNKEETDYKTSANQNKEEIEPLQEQRKAH 415
E + +K K + S NQ+K EI P QR+ H
Sbjct: 536 ETEEEKKKTKQSLSPSENQSKMEILPKTTQRQHH 569
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 25.8 bits (54), Expect = 0.88
Identities = 15/74 (20%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 363 KEILSRKTSQHLPRKHKQFEYKPQKNKEETDYKTSANQNKEEIEPLQEQRKAHEHKSYAD 422
++ L +TS + ++ E K KN E +Y+ +KE +E+ ++ E K +
Sbjct: 260 EKFLEERTSHKRYSRSREREQKSYKN--EREYRKYRETSKERFRDRRERERSKESKIISS 317
Query: 423 TVRSQVWDVRNMRS 436
+ + N ++
Sbjct: 318 LSNKTIHNNNNYKN 331
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.4 bits (53), Expect = 1.2
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 361 VYKEILSRKTSQHLPRKHKQFEYKPQKNKEETDYKTSANQNKEEIEPLQEQRKAHEHK 418
V ++ L +TS+ + ++ E K KN+ E Y+ ++E +E+ ++ EH+
Sbjct: 25 VEEKHLRERTSRRRYSRSREREQKSYKNERE--YREYRETSRERSRDRRERGRSREHR 80
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.4 bits (53), Expect = 1.2
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 361 VYKEILSRKTSQHLPRKHKQFEYKPQKNKEETDYKTSANQNKEEIEPLQEQRKAHEHK 418
V ++ L +TS+ + ++ E K KN+ E Y+ ++E +E+ ++ EH+
Sbjct: 25 VEEKHLRERTSRRRYSRSREREQKSYKNERE--YREYRETSRERSRDRRERGRSREHR 80
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.4 bits (53), Expect = 1.2
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 361 VYKEILSRKTSQHLPRKHKQFEYKPQKNKEETDYKTSANQNKEEIEPLQEQRKAHEHK 418
V ++ L +TS+ + ++ E K KN+ E Y+ ++E +E+ ++ EH+
Sbjct: 25 VEEKHLRERTSRRRYSRSREREQKSYKNERE--YREYRETSRERSRDRRERGRSREHR 80
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.4 bits (53), Expect = 1.2
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 361 VYKEILSRKTSQHLPRKHKQFEYKPQKNKEETDYKTSANQNKEEIEPLQEQRKAHEHK 418
V ++ L +TS+ + ++ E K KN+ E Y+ ++E +E+ ++ EH+
Sbjct: 25 VEEKHLRERTSRRRYSRSREREQKSYKNERE--YREYRETSRERSRDRRERGRSREHR 80
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.4 bits (53), Expect = 1.2
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 361 VYKEILSRKTSQHLPRKHKQFEYKPQKNKEETDYKTSANQNKEEIEPLQEQRKAHEHK 418
V ++ L +TS+ + ++ E K KN+ E Y+ ++E +E+ ++ EH+
Sbjct: 25 VEEKHLRERTSRRRYSRSREREQKSYKNERE--YREYRETSRERSRDRRERGRSREHR 80
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.4 bits (53), Expect = 1.2
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 361 VYKEILSRKTSQHLPRKHKQFEYKPQKNKEETDYKTSANQNKEEIEPLQEQRKAHEHK 418
V ++ L +TS+ + ++ E K KN+ E Y+ ++E +E+ ++ EH+
Sbjct: 25 VEEKHLRERTSRRRYSRSREREQKSYKNERE--YREYRETSRERSRDRRERGRSREHR 80
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.4 bits (53), Expect = 1.2
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 361 VYKEILSRKTSQHLPRKHKQFEYKPQKNKEETDYKTSANQNKEEIEPLQEQRKAHEHK 418
V ++ L +TS+ + ++ E K KN+ E Y+ ++E +E+ ++ EH+
Sbjct: 25 VEEKHLRERTSRRRYSRSREREQKSYKNERE--YREYRETSRERSRDRRERGRSREHR 80
>AY569719-1|AAS86672.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.4 bits (53), Expect = 1.2
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 361 VYKEILSRKTSQHLPRKHKQFEYKPQKNKEETDYKTSANQNKEEIEPLQEQRKAHEHK 418
V ++ L +TS+ + ++ E K KN+ E Y+ ++E +E+ ++ EH+
Sbjct: 274 VEEKHLRERTSRRRYSRSREREQKSYKNERE--YREYRETSRERSRDRRERGRSREHR 329
>AY569718-1|AAS86671.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.4 bits (53), Expect = 1.2
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 361 VYKEILSRKTSQHLPRKHKQFEYKPQKNKEETDYKTSANQNKEEIEPLQEQRKAHEHK 418
V ++ L +TS+ + ++ E K KN+ E Y+ ++E +E+ ++ EH+
Sbjct: 274 VEEKHLRERTSRRRYSRSREREQKSYKNERE--YREYRETSRERSRDRRERGRSREHR 329
>AY569715-1|AAS86668.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.4 bits (53), Expect = 1.2
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 361 VYKEILSRKTSQHLPRKHKQFEYKPQKNKEETDYKTSANQNKEEIEPLQEQRKAHEHK 418
V ++ L +TS+ + ++ E K KN+ E Y+ ++E +E+ ++ EH+
Sbjct: 274 VEEKHLRERTSRRRYSRSREREQKSYKNERE--YREYRETSRERSRDRRERGRSREHR 329
>AY569714-1|AAS86667.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.4 bits (53), Expect = 1.2
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 361 VYKEILSRKTSQHLPRKHKQFEYKPQKNKEETDYKTSANQNKEEIEPLQEQRKAHEHK 418
V ++ L +TS+ + ++ E K KN+ E Y+ ++E +E+ ++ EH+
Sbjct: 274 VEEKHLRERTSRRRYSRSREREQKSYKNERE--YREYRETSRERSRDRRERGRSREHR 329
>AY569713-1|AAS86666.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.4 bits (53), Expect = 1.2
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 361 VYKEILSRKTSQHLPRKHKQFEYKPQKNKEETDYKTSANQNKEEIEPLQEQRKAHEHK 418
V ++ L +TS+ + ++ E K KN+ E Y+ ++E +E+ ++ EH+
Sbjct: 274 VEEKHLRERTSRRRYSRSREREQKSYKNERE--YREYRETSRERSRDRRERGRSREHR 329
>AY569711-1|AAS86664.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.4 bits (53), Expect = 1.2
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 361 VYKEILSRKTSQHLPRKHKQFEYKPQKNKEETDYKTSANQNKEEIEPLQEQRKAHEHK 418
V ++ L +TS+ + ++ E K KN+ E Y+ ++E +E+ ++ EH+
Sbjct: 274 VEEKHLRERTSRRRYSRSREREQKSYKNERE--YREYRETSRERSRDRRERGRSREHR 329
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 25.4 bits (53), Expect = 1.2
Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 363 KEILSRKTSQHLPRKHKQFEYKPQKNKEETDYKTSANQNKEEIEPLQEQRKAHEHK 418
+++L +TS+ + ++ E K KN E +Y+ +KE E+ ++ E K
Sbjct: 249 EKLLEERTSRKRYSRSREREQKSYKN--EREYRKYGKTSKERSRDRMERERSKEPK 302
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.4 bits (53), Expect = 1.2
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 361 VYKEILSRKTSQHLPRKHKQFEYKPQKNKEETDYKTSANQNKEEIEPLQEQRKAHEHK 418
V ++ L +TS+ + ++ E K KN+ E Y+ ++E +E+ ++ EH+
Sbjct: 274 VEEKHLRERTSRRRYSRSREREQKSYKNERE--YREYRETSRERSRDRRERGRSREHR 329
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.8 bits (49), Expect = 3.6
Identities = 13/56 (23%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 363 KEILSRKTSQHLPRKHKQFEYKPQKNKEETDYKTSANQNKEEIEPLQEQRKAHEHK 418
+++L +TS+ + ++ E KN+ E Y+ ++KE E+ ++ E K
Sbjct: 260 EKLLEERTSRKRYSRSREREQNSYKNERE--YRKYRERSKERSRDRTERERSREPK 313
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.0 bits (47), Expect = 6.2
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 56 ENLNLSQSNSQKVKASHKLRVQTSKIVSSFKAPTYSCQLI 95
ENL+ S SN+Q AS + T+ + SFK PT + L+
Sbjct: 607 ENLS-SGSNNQTSSASRENTSNTTSM-ESFKPPTLTESLL 644
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.6 bits (46), Expect = 8.2
Identities = 13/76 (17%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 359 CEVYKEILSRKTSQHLPRKHKQFEYKPQKNKEETDYKTSANQNKEEIEPLQEQRKAHEHK 418
C+ Y SR+ Q L + +++ + +KE + +T ++KE + + + +
Sbjct: 269 CKRYSR--SREREQKLYKNEREYRKYGETSKERSRNRTEREKSKEP-KIISSLSNNYNYN 325
Query: 419 SYADTVRSQVWDVRNM 434
+Y + + +++ N+
Sbjct: 326 NYNNNYKPLYYNIINI 341
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.6 bits (46), Expect = 8.2
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 259 GHDHELTHASAHHN 272
GH H HA+ HH+
Sbjct: 420 GHGHSHIHATPHHH 433
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.6 bits (46), Expect = 8.2
Identities = 13/81 (16%), Positives = 36/81 (44%)
Query: 379 KQFEYKPQKNKEETDYKTSANQNKEEIEPLQEQRKAHEHKSYADTVRSQVWDVRNMRSAL 438
+Q + + Q+ ++ +T N ++ + Q+Q++ + + + Q W + +A
Sbjct: 414 QQQQMQAQQQHQQQQQQTQHVINAQQPQQQQQQQQQQQQQQQQQQQQQQHWPMEEEPAAS 473
Query: 439 ATIRSDSSVNRVGVSSAGLIA 459
SD +++ S G ++
Sbjct: 474 WGSASDVTLDEAVKSPLGSVS 494
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.317 0.130 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,350
Number of Sequences: 429
Number of extensions: 6833
Number of successful extensions: 74
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 57
Number of HSP's gapped (non-prelim): 31
length of query: 527
length of database: 140,377
effective HSP length: 61
effective length of query: 466
effective length of database: 114,208
effective search space: 53220928
effective search space used: 53220928
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 46 (22.6 bits)
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