GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004945-TA|BGIBMGA004945-PA|IPR004142|Ndr
         (325 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    23   3.6  

>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 12/36 (33%), Positives = 18/36 (50%)

Query: 151 GANILSRYAIINPQKVDALVLINCTSTQAGWTEWLY 186
           G+ I S  A++ P+K+  L    CTS       WL+
Sbjct: 6   GSVIASDMAVLFPEKIIGLHNNMCTSLNLSNLFWLF 41


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.135    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,241
Number of Sequences: 429
Number of extensions: 3425
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1
length of query: 325
length of database: 140,377
effective HSP length: 58
effective length of query: 267
effective length of database: 115,495
effective search space: 30837165
effective search space used: 30837165
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)