GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004930-TA|BGIBMGA004930-PA|IPR002495|Glycosyl
transferase, family 8
         (321 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    26   0.38 
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          24   2.0  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   3.6  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   6.2  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 26.2 bits (55), Expect = 0.38
 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 2/48 (4%)

Query: 15  DSRFNESLNLLKSGLIFTQSSLHVVIFAEDDLHKKFNSTLTKWKMLIA 62
           +SR     N  K+G  F++SS   ++ +E   H    S++T  KM+++
Sbjct: 235 NSRLEPGTN--KNGKFFSRSSTSRIVISESLKHFTIQSSVTTSKMMVS 280


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)

Query: 121 ILWNYFTKFKATEISALALE 140
           I W Y  K+K T + A+A E
Sbjct: 131 INWEYLDKYKPTPLGAVATE 150


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/30 (33%), Positives = 18/30 (60%)

Query: 278 PKMLLVNMEKYLNETPPSNCGNLKDAFLKI 307
           P +L++  E   +ET PS+C   ++ F +I
Sbjct: 175 PPLLIMGNEHTYSETGPSHCVVCQNFFYQI 204


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 11/60 (18%), Positives = 28/60 (46%)

Query: 207 FHYHERAVHELSCRYNYRSDQCMYGDACTDATSNGIFVLHGSRRAFYSDKQPAFQAVHRA 266
           F Y  + +  +    ++ +   ++G A +  T+N  +    SR  +Y + +P  ++ + A
Sbjct: 232 FDYDPKYIKMMDAGESFTAQDGIFGMALSPMTNNLYYSPLSSRSLYYVNTKPFMKSEYGA 291


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.324    0.138    0.440 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,357
Number of Sequences: 429
Number of extensions: 4507
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 4
length of query: 321
length of database: 140,377
effective HSP length: 58
effective length of query: 263
effective length of database: 115,495
effective search space: 30375185
effective search space used: 30375185
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 44 (21.8 bits)