GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004919-TA|BGIBMGA004919-PA|IPR000760|Inositol
monophosphatase
         (282 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    23   2.3  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    23   2.3  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   9.3  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    21   9.3  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    21   9.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.3  

>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 11/27 (40%), Positives = 19/27 (70%), Gaps = 2/27 (7%)

Query: 10  EKGKDDYQTEADRSAQRCIVASLAAQY 36
           E+ +D  +TE +RS +R I++SL+  Y
Sbjct: 298 ERSRD--RTERERSKERKIISSLSNNY 322


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 11/27 (40%), Positives = 19/27 (70%), Gaps = 2/27 (7%)

Query: 10  EKGKDDYQTEADRSAQRCIVASLAAQY 36
           E+ +D  +TE +RS +R I++SL+  Y
Sbjct: 303 ERSRD--KTERERSKERKIISSLSNNY 327


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 65  KEILKLQCPPNLQEVKEEDIVVWVDPLDGTSEYTQGFLEHVTVLIGIAVNE 115
           +E +   CP N +E+K +DI   ++ LD   + T       ++L+  A+++
Sbjct: 331 REEINTFCPKNNKELKYDDIKE-MEYLDKVFKETLRMYPPASILMRKAISD 380


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 11  KGKDDYQTEADRSAQRCIVASLAAQYPN 38
           KG+   +TE +RS +  I++S    Y N
Sbjct: 286 KGRSRDRTERERSKETKIISSNNYNYKN 313


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 11  KGKDDYQTEADRSAQRCIVASLAAQYPN 38
           KG+   +TE +RS +  I++S    Y N
Sbjct: 297 KGRSRDRTERERSKETKIISSNNYNYKN 324


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 12/43 (27%), Positives = 21/43 (48%)

Query: 7    GIVEKGKDDYQTEADRSAQRCIVASLAAQYPNLKIIGEEDSLE 49
            G+V + +  Y +  +RS ++        Q     +IG EDS+E
Sbjct: 1555 GLVVQLQRGYNSGNNRSGEQANSQQQQQQQSGEPVIGMEDSVE 1597


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.313    0.134    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,330
Number of Sequences: 429
Number of extensions: 3792
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 6
length of query: 282
length of database: 140,377
effective HSP length: 57
effective length of query: 225
effective length of database: 115,924
effective search space: 26082900
effective search space used: 26082900
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 43 (21.4 bits)