GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004891-TA|BGIBMGA004891-PA|IPR009038|GOLD
         (205 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    22   4.7  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   4.7  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    22   4.7  

>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1
          alpha protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)

Query: 33 KEELHANVLVAGEYD 47
          KE++H N++V G  D
Sbjct: 3  KEKIHINIVVIGHVD 17


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 112 IKIGIEAKTYEGIGEAAKL 130
           I + I+ +T+EG G + KL
Sbjct: 184 ISVTIDGETFEGTGPSKKL 202


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation
          factor-1alpha F2 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)

Query: 33 KEELHANVLVAGEYD 47
          KE++H N++V G  D
Sbjct: 3  KEKIHINIVVIGHVD 17


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.136    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,959
Number of Sequences: 429
Number of extensions: 2025
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 3
length of query: 205
length of database: 140,377
effective HSP length: 55
effective length of query: 150
effective length of database: 116,782
effective search space: 17517300
effective search space used: 17517300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 42 (21.0 bits)