GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004886-TA|BGIBMGA004886-PA|undefined
         (90 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   1.8  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    19   7.3  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    19   7.3  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    19   9.6  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 1.8
 Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)

Query: 19  GKMPIDLVIDERETARPPDANGEPRSAPDSSH 50
           G++ +D + D    A  P   G+P  +PDS H
Sbjct: 724 GQLLLDYLTDT-VLAYKPKILGKPTISPDSRH 754


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 19.4 bits (38), Expect = 7.3
 Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 1/29 (3%)

Query: 9   FCHRYISCLKGKMPIDLVIDERETARPPD 37
           +C RY  CL   M  + V +ER+  +  D
Sbjct: 164 YC-RYQKCLAMGMKREAVQEERQRTKERD 191


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 19.4 bits (38), Expect = 7.3
 Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 1/29 (3%)

Query: 9   FCHRYISCLKGKMPIDLVIDERETARPPD 37
           +C RY  CL   M  + V +ER+  +  D
Sbjct: 164 YC-RYQKCLAMGMKREAVQEERQRTKERD 191


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 19.0 bits (37), Expect = 9.6
 Identities = 5/19 (26%), Positives = 10/19 (52%)

Query: 19  GKMPIDLVIDERETARPPD 37
           G    D+++ + E   PP+
Sbjct: 82  GNFDFDMIVKQLEITMPPE 100


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.315    0.132    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,880
Number of Sequences: 429
Number of extensions: 1414
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 90
length of database: 140,377
effective HSP length: 48
effective length of query: 42
effective length of database: 119,785
effective search space:  5030970
effective search space used:  5030970
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.8 bits)
S2: 37 (19.0 bits)