BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004885-TA|BGIBMGA004885-PA|undefined
(73 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U85707-1|AAC51642.1| 390|Homo sapiens leukemogenic homolog prot... 102 2e-22
BC043503-1|AAH43503.1| 390|Homo sapiens MEIS1 protein protein. 102 2e-22
BC036511-1|AAH36511.1| 378|Homo sapiens MEIS1 protein protein. 102 2e-22
AC092669-1|AAY24268.1| 247|Homo sapiens unknown protein. 102 2e-22
BC050431-1|AAH50431.1| 470|Homo sapiens MEIS2 protein protein. 101 5e-22
BC007202-1|AAH07202.1| 381|Homo sapiens Meis homeobox 2 protein. 101 5e-22
BC001844-1|AAH01844.3| 381|Homo sapiens Meis homeobox 2 protein. 101 5e-22
BC001516-1|AAH01516.1| 381|Homo sapiens Meis homeobox 2 protein. 101 5e-22
AF179899-1|AAF81642.1| 302|Homo sapiens TALE homeobox protein M... 101 5e-22
AF179898-1|AAF81641.1| 470|Homo sapiens TALE homeobox protein M... 101 5e-22
AF179897-1|AAF81640.1| 477|Homo sapiens TALE homeobox protein M... 101 5e-22
AF179896-1|AAF81639.1| 394|Homo sapiens TALE homeobox protein M... 101 5e-22
AF178948-1|AAF81638.1| 401|Homo sapiens TALE homeobox protein M... 101 5e-22
BC069251-1|AAH69251.1| 358|Homo sapiens Meis homeobox 3 protein. 82 2e-16
BC025404-1|AAH25404.1| 421|Homo sapiens Meis homeobox 3 protein. 82 2e-16
AL359938-1|CAB95771.1| 382|Homo sapiens hypothetical protein pr... 82 2e-16
AY091593-1|AAM09846.1| 267|Homo sapiens MEIS1-related protein 2... 42 3e-04
BC045626-1|AAH45626.3| 471|Homo sapiens PBX/knotted 1 homeobox ... 40 0.001
AK023136-1|BAB14422.1| 306|Homo sapiens protein ( Homo sapiens ... 40 0.001
AJ417081-1|CAD01142.1| 460|Homo sapiens PREP2 protein protein. 40 0.001
AB065001-1|BAB83665.1| 460|Homo sapiens PKNOX2 protein. 40 0.001
Y13613-1|CAA73934.1| 436|Homo sapiens Prep-1 protein. 40 0.002
U68727-1|AAC51243.1| 435|Homo sapiens homeobox-containing prote... 40 0.002
BC007746-1|AAH07746.1| 436|Homo sapiens PBX/knotted 1 homeobox ... 40 0.002
BC000735-1|AAH00735.1| 336|Homo sapiens PKNOX1 protein protein. 40 0.002
AY566249-1|AAT70235.1| 218|Homo sapiens pkonx1c protein. 40 0.002
AY196965-1|AAO45825.1| 436|Homo sapiens homeobox-containing pro... 40 0.002
AY142115-1|AAN34940.1| 405|Homo sapiens PKNOX1B protein. 40 0.002
AP001748-1|BAA95533.1| 435|Homo sapiens homeobox-containing pro... 40 0.002
AK222892-1|BAD96612.1| 436|Homo sapiens PBX/knotted 1 homeobox ... 40 0.002
>U85707-1|AAC51642.1| 390|Homo sapiens leukemogenic homolog protein
protein.
Length = 390
Score = 102 bits (245), Expect = 2e-22
Identities = 45/48 (93%), Positives = 48/48 (100%)
Query: 4 HPLFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQM 51
HPLFPLLALIFEKCELATCTPR+PGVAGGDVCSSESFNEDIAVF+KQ+
Sbjct: 81 HPLFPLLALIFEKCELATCTPREPGVAGGDVCSSESFNEDIAVFAKQI 128
>BC043503-1|AAH43503.1| 390|Homo sapiens MEIS1 protein protein.
Length = 390
Score = 102 bits (245), Expect = 2e-22
Identities = 45/48 (93%), Positives = 48/48 (100%)
Query: 4 HPLFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQM 51
HPLFPLLALIFEKCELATCTPR+PGVAGGDVCSSESFNEDIAVF+KQ+
Sbjct: 81 HPLFPLLALIFEKCELATCTPREPGVAGGDVCSSESFNEDIAVFAKQI 128
>BC036511-1|AAH36511.1| 378|Homo sapiens MEIS1 protein protein.
Length = 378
Score = 102 bits (245), Expect = 2e-22
Identities = 45/48 (93%), Positives = 48/48 (100%)
Query: 4 HPLFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQM 51
HPLFPLLALIFEKCELATCTPR+PGVAGGDVCSSESFNEDIAVF+KQ+
Sbjct: 81 HPLFPLLALIFEKCELATCTPREPGVAGGDVCSSESFNEDIAVFAKQI 128
>AC092669-1|AAY24268.1| 247|Homo sapiens unknown protein.
Length = 247
Score = 102 bits (245), Expect = 2e-22
Identities = 45/48 (93%), Positives = 48/48 (100%)
Query: 4 HPLFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQM 51
HPLFPLLALIFEKCELATCTPR+PGVAGGDVCSSESFNEDIAVF+KQ+
Sbjct: 81 HPLFPLLALIFEKCELATCTPREPGVAGGDVCSSESFNEDIAVFAKQI 128
>BC050431-1|AAH50431.1| 470|Homo sapiens MEIS2 protein protein.
Length = 470
Score = 101 bits (241), Expect = 5e-22
Identities = 43/48 (89%), Positives = 48/48 (100%)
Query: 4 HPLFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQM 51
HPLFPLLAL+FEKCELATCTPR+PGVAGGDVCSS+SFNEDIAVF+KQ+
Sbjct: 83 HPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQV 130
>BC007202-1|AAH07202.1| 381|Homo sapiens Meis homeobox 2 protein.
Length = 381
Score = 101 bits (241), Expect = 5e-22
Identities = 43/48 (89%), Positives = 48/48 (100%)
Query: 4 HPLFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQM 51
HPLFPLLAL+FEKCELATCTPR+PGVAGGDVCSS+SFNEDIAVF+KQ+
Sbjct: 70 HPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQV 117
>BC001844-1|AAH01844.3| 381|Homo sapiens Meis homeobox 2 protein.
Length = 381
Score = 101 bits (241), Expect = 5e-22
Identities = 43/48 (89%), Positives = 48/48 (100%)
Query: 4 HPLFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQM 51
HPLFPLLAL+FEKCELATCTPR+PGVAGGDVCSS+SFNEDIAVF+KQ+
Sbjct: 70 HPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQV 117
>BC001516-1|AAH01516.1| 381|Homo sapiens Meis homeobox 2 protein.
Length = 381
Score = 101 bits (241), Expect = 5e-22
Identities = 43/48 (89%), Positives = 48/48 (100%)
Query: 4 HPLFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQM 51
HPLFPLLAL+FEKCELATCTPR+PGVAGGDVCSS+SFNEDIAVF+KQ+
Sbjct: 70 HPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQV 117
>AF179899-1|AAF81642.1| 302|Homo sapiens TALE homeobox protein
Meis2e protein.
Length = 302
Score = 101 bits (241), Expect = 5e-22
Identities = 43/48 (89%), Positives = 48/48 (100%)
Query: 4 HPLFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQM 51
HPLFPLLAL+FEKCELATCTPR+PGVAGGDVCSS+SFNEDIAVF+KQ+
Sbjct: 83 HPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQV 130
>AF179898-1|AAF81641.1| 470|Homo sapiens TALE homeobox protein
Meis2d protein.
Length = 470
Score = 101 bits (241), Expect = 5e-22
Identities = 43/48 (89%), Positives = 48/48 (100%)
Query: 4 HPLFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQM 51
HPLFPLLAL+FEKCELATCTPR+PGVAGGDVCSS+SFNEDIAVF+KQ+
Sbjct: 83 HPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQV 130
>AF179897-1|AAF81640.1| 477|Homo sapiens TALE homeobox protein
Meis2c protein.
Length = 477
Score = 101 bits (241), Expect = 5e-22
Identities = 43/48 (89%), Positives = 48/48 (100%)
Query: 4 HPLFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQM 51
HPLFPLLAL+FEKCELATCTPR+PGVAGGDVCSS+SFNEDIAVF+KQ+
Sbjct: 83 HPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQV 130
>AF179896-1|AAF81639.1| 394|Homo sapiens TALE homeobox protein
Meis2b protein.
Length = 394
Score = 101 bits (241), Expect = 5e-22
Identities = 43/48 (89%), Positives = 48/48 (100%)
Query: 4 HPLFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQM 51
HPLFPLLAL+FEKCELATCTPR+PGVAGGDVCSS+SFNEDIAVF+KQ+
Sbjct: 83 HPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQV 130
>AF178948-1|AAF81638.1| 401|Homo sapiens TALE homeobox protein
Meis2a protein.
Length = 401
Score = 101 bits (241), Expect = 5e-22
Identities = 43/48 (89%), Positives = 48/48 (100%)
Query: 4 HPLFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQM 51
HPLFPLLAL+FEKCELATCTPR+PGVAGGDVCSS+SFNEDIAVF+KQ+
Sbjct: 83 HPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQV 130
>BC069251-1|AAH69251.1| 358|Homo sapiens Meis homeobox 3 protein.
Length = 358
Score = 82.2 bits (194), Expect = 2e-16
Identities = 39/54 (72%), Positives = 44/54 (81%), Gaps = 6/54 (11%)
Query: 4 HPLFPLLALIFEKCELATCTPRDPGVA------GGDVCSSESFNEDIAVFSKQM 51
HPLFPLLAL+FEKCELATC+PRD A GGDVCSS+SFNEDIA F+KQ+
Sbjct: 63 HPLFPLLALVFEKCELATCSPRDGAGAGLGTPPGGDVCSSDSFNEDIAAFAKQV 116
>BC025404-1|AAH25404.1| 421|Homo sapiens Meis homeobox 3 protein.
Length = 421
Score = 82.2 bits (194), Expect = 2e-16
Identities = 39/54 (72%), Positives = 44/54 (81%), Gaps = 6/54 (11%)
Query: 4 HPLFPLLALIFEKCELATCTPRDPGVA------GGDVCSSESFNEDIAVFSKQM 51
HPLFPLLAL+FEKCELATC+PRD A GGDVCSS+SFNEDIA F+KQ+
Sbjct: 63 HPLFPLLALVFEKCELATCSPRDGAGAGLGTPPGGDVCSSDSFNEDIAAFAKQV 116
>AL359938-1|CAB95771.1| 382|Homo sapiens hypothetical protein
protein.
Length = 382
Score = 82.2 bits (194), Expect = 2e-16
Identities = 39/54 (72%), Positives = 44/54 (81%), Gaps = 6/54 (11%)
Query: 4 HPLFPLLALIFEKCELATCTPRDPGVA------GGDVCSSESFNEDIAVFSKQM 51
HPLFPLLAL+FEKCELATC+PRD A GGDVCSS+SFNEDIA F+KQ+
Sbjct: 70 HPLFPLLALVFEKCELATCSPRDGAGAGLGTPPGGDVCSSDSFNEDIAAFAKQV 123
>AY091593-1|AAM09846.1| 267|Homo sapiens MEIS1-related protein 2
protein.
Length = 267
Score = 41.9 bits (94), Expect = 3e-04
Identities = 17/21 (80%), Positives = 20/21 (95%)
Query: 31 GGDVCSSESFNEDIAVFSKQM 51
GGDVCSS+SFNEDIA F+KQ+
Sbjct: 5 GGDVCSSDSFNEDIAAFAKQV 25
>BC045626-1|AAH45626.3| 471|Homo sapiens PBX/knotted 1 homeobox 2
protein.
Length = 471
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/47 (48%), Positives = 27/47 (57%), Gaps = 8/47 (17%)
Query: 4 HPLFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQ 50
HPLFPLL L+FEKCE AT G + +S SF+ DI F Q
Sbjct: 77 HPLFPLLTLLFEKCEQAT--------QGSECITSASFDVDIENFVHQ 115
>AK023136-1|BAB14422.1| 306|Homo sapiens protein ( Homo sapiens
cDNA FLJ13074 fis, clone NT2RP3001855, moderately
similar to HOMEOBOX PROTEIN PKNOX1. ).
Length = 306
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/47 (48%), Positives = 27/47 (57%), Gaps = 8/47 (17%)
Query: 4 HPLFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQ 50
HPLFPLL L+FEKCE AT G + +S SF+ DI F Q
Sbjct: 65 HPLFPLLTLLFEKCEQAT--------QGSECITSASFDVDIENFVHQ 103
>AJ417081-1|CAD01142.1| 460|Homo sapiens PREP2 protein protein.
Length = 460
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/47 (48%), Positives = 27/47 (57%), Gaps = 8/47 (17%)
Query: 4 HPLFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQ 50
HPLFPLL L+FEKCE AT G + +S SF+ DI F Q
Sbjct: 65 HPLFPLLTLLFEKCEQAT--------QGSECITSASFDVDIENFVHQ 103
>AB065001-1|BAB83665.1| 460|Homo sapiens PKNOX2 protein.
Length = 460
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/47 (48%), Positives = 27/47 (57%), Gaps = 8/47 (17%)
Query: 4 HPLFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQ 50
HPLFPLL L+FEKCE AT G + +S SF+ DI F Q
Sbjct: 65 HPLFPLLTLLFEKCEQAT--------QGSECITSASFDVDIENFVHQ 103
>Y13613-1|CAA73934.1| 436|Homo sapiens Prep-1 protein.
Length = 436
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 8/47 (17%)
Query: 4 HPLFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQ 50
HPLFPLLAL+FEKCE +T G + +S SF+ DI F ++
Sbjct: 61 HPLFPLLALLFEKCEQST--------QGSEGTTSASFDVDIENFVRK 99
>U68727-1|AAC51243.1| 435|Homo sapiens homeobox-containing
protein protein.
Length = 435
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 8/47 (17%)
Query: 4 HPLFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQ 50
HPLFPLLAL+FEKCE +T G + +S SF+ DI F ++
Sbjct: 60 HPLFPLLALLFEKCEQST--------QGSEGTTSASFDVDIENFVRK 98
>BC007746-1|AAH07746.1| 436|Homo sapiens PBX/knotted 1 homeobox 1
protein.
Length = 436
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 8/47 (17%)
Query: 4 HPLFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQ 50
HPLFPLLAL+FEKCE +T G + +S SF+ DI F ++
Sbjct: 61 HPLFPLLALLFEKCEQST--------QGSEGTTSASFDVDIENFVRK 99
>BC000735-1|AAH00735.1| 336|Homo sapiens PKNOX1 protein protein.
Length = 336
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 8/47 (17%)
Query: 4 HPLFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQ 50
HPLFPLLAL+FEKCE +T G + +S SF+ DI F ++
Sbjct: 61 HPLFPLLALLFEKCEQST--------QGSEGTTSASFDVDIENFVRK 99
>AY566249-1|AAT70235.1| 218|Homo sapiens pkonx1c protein.
Length = 218
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 8/47 (17%)
Query: 4 HPLFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQ 50
HPLFPLLAL+FEKCE +T G + +S SF+ DI F ++
Sbjct: 61 HPLFPLLALLFEKCEQST--------QGSEGTTSASFDVDIENFVRK 99
>AY196965-1|AAO45825.1| 436|Homo sapiens homeobox-containing
protein PKNOX1 protein.
Length = 436
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 8/47 (17%)
Query: 4 HPLFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQ 50
HPLFPLLAL+FEKCE +T G + +S SF+ DI F ++
Sbjct: 61 HPLFPLLALLFEKCEQST--------QGSEGTTSASFDVDIENFVRK 99
>AY142115-1|AAN34940.1| 405|Homo sapiens PKNOX1B protein.
Length = 405
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 8/47 (17%)
Query: 4 HPLFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQ 50
HPLFPLLAL+FEKCE +T G + +S SF+ DI F ++
Sbjct: 61 HPLFPLLALLFEKCEQST--------QGSEGTTSASFDVDIENFVRK 99
>AP001748-1|BAA95533.1| 435|Homo sapiens homeobox-containing
protein protein.
Length = 435
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 8/47 (17%)
Query: 4 HPLFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQ 50
HPLFPLLAL+FEKCE +T G + +S SF+ DI F ++
Sbjct: 60 HPLFPLLALLFEKCEQST--------QGSEGTTSASFDVDIENFVRK 98
>AK222892-1|BAD96612.1| 436|Homo sapiens PBX/knotted 1 homeobox 1
isoform 1 variant protein.
Length = 436
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 8/47 (17%)
Query: 4 HPLFPLLALIFEKCELATCTPRDPGVAGGDVCSSESFNEDIAVFSKQ 50
HPLFPLLAL+FEKCE +T G + +S SF+ DI F ++
Sbjct: 61 HPLFPLLALLFEKCEQST--------QGSEGTTSASFDVDIENFVRK 99
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.322 0.134 0.423
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,320,146
Number of Sequences: 224733
Number of extensions: 348264
Number of successful extensions: 555
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 522
Number of HSP's gapped (non-prelim): 30
length of query: 73
length of database: 73,234,838
effective HSP length: 52
effective length of query: 21
effective length of database: 61,548,722
effective search space: 1292523162
effective search space used: 1292523162
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 57 (27.1 bits)
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