Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004882-TA|BGIBMGA004882-PA|IPR000504|RNA-binding region
RNP-1 (RNA recognition motif)
(252 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 26 0.29
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 26 0.38
AY569702-1|AAS86655.1| 400|Apis mellifera complementary sex det... 25 0.50
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 25 0.87
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 25 0.87
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 25 0.87
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 24 1.5
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 24 1.5
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 24 1.5
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 24 1.5
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 24 1.5
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 24 1.5
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 24 1.5
AY569719-1|AAS86672.1| 401|Apis mellifera complementary sex det... 24 1.5
AY569718-1|AAS86671.1| 401|Apis mellifera complementary sex det... 24 1.5
AY569715-1|AAS86668.1| 401|Apis mellifera complementary sex det... 24 1.5
AY569714-1|AAS86667.1| 401|Apis mellifera complementary sex det... 24 1.5
AY569713-1|AAS86666.1| 401|Apis mellifera complementary sex det... 24 1.5
AY569711-1|AAS86664.1| 401|Apis mellifera complementary sex det... 24 1.5
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 24 1.5
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 23 2.7
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 23 2.7
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 23 2.7
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 23 2.7
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 23 2.7
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 3.5
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 3.5
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 3.5
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 3.5
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 3.5
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 3.5
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 3.5
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 23 3.5
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 23 3.5
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 3.5
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 3.5
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 3.5
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 3.5
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 23 3.5
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 23 3.5
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 22 4.7
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 22 4.7
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 4.7
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 4.7
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 4.7
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 8.2
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 8.2
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 8.2
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 8.2
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 8.2
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 8.2
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 8.2
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 8.2
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 8.2
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 8.2
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 8.2
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 26.2 bits (55), Expect = 0.29
Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Query: 183 YDEPPYDDRHYDERAQYERPRPAHHIPNGDMYSRRSPAPMYSGRGGPAPVAGGYERDHYV 242
Y+ Y++ +Y+ + ++I N + P P+Y G P P+ +
Sbjct: 333 YNNNNYNNNNYNNNYNNNCKKLYYNIINIEQIPVPVPVPIYCGNFPPRPMGPWISIQEQI 392
Query: 243 P--QYMQPP 249
P +Y+ PP
Sbjct: 393 PRFRYIGPP 401
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 25.8 bits (54), Expect = 0.38
Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 4/65 (6%)
Query: 168 ERYQNHISVVEGTRRYDEPPYDDRHYDERAQYERPRPAHHIPNGDMYSRRSPAPMYSGRG 227
ER Q R+Y E +R D R ER R H Y + P P+Y G
Sbjct: 277 EREQKSYKNENSYRKYRETS-KERSRDRR---ERGRSREHRIIPSHYIEQIPVPVYYGNF 332
Query: 228 GPAPV 232
P P+
Sbjct: 333 PPRPI 337
>AY569702-1|AAS86655.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 25.4 bits (53), Expect = 0.50
Identities = 29/108 (26%), Positives = 40/108 (37%), Gaps = 7/108 (6%)
Query: 128 GPPAAPYDERYAYGEDRRGFALM---DRGPRDXXXXXXXXXXDERYQNHISVVEGTRRYD 184
G + D Y +DRR L ++ R+ ER Q R Y
Sbjct: 249 GERSCSRDRSREYKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYR 308
Query: 185 EPPYDDRHYDERAQYERPRPAHHIPNGDMYSRRSPAPMYSGRGGPAPV 232
E + R D R + R R IP+ Y + PAP+Y G P P+
Sbjct: 309 ETSRE-RSRDRRGR-GRSREHRIIPSH--YIEQIPAPVYYGNFPPRPI 352
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.6 bits (51), Expect = 0.87
Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 9/69 (13%)
Query: 183 YDEPPYDDRHYDERAQYERPRPAHHIPNGDMYSRRSPAPMYSGRGGPAPVAGGYERDHYV 242
Y+ Y++ +Y+++ Y +I N + P P+Y G P P+ +
Sbjct: 98 YNNNNYNNNNYNKKLYY-------NIINIEQIPVPVPVPVYCGNFPPRPMGPWISMQEQI 150
Query: 243 P--QYMQPP 249
P +Y+ PP
Sbjct: 151 PRFRYIGPP 159
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.6 bits (51), Expect = 0.87
Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 9/69 (13%)
Query: 183 YDEPPYDDRHYDERAQYERPRPAHHIPNGDMYSRRSPAPMYSGRGGPAPVAGGYERDHYV 242
Y+ Y++ +Y+++ Y +I N + P P+Y G P P+ +
Sbjct: 98 YNNNNYNNNNYNKKLYY-------NIINIEQIPVPVPVPVYCGNFPPRPMGPWISMQEQI 150
Query: 243 P--QYMQPP 249
P +Y+ PP
Sbjct: 151 PRFRYIGPP 159
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 24.6 bits (51), Expect = 0.87
Identities = 14/75 (18%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Query: 177 VEGTRRYDEPPYDDRHYDERAQYERPRPAHHIPNGDMYSRRSPAPMYSGRGGPAPVAGGY 236
+ Y+ Y++ +Y+ + ++I + P P+Y G P P+
Sbjct: 90 IHNNNNYNNNNYNNYNYNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCGNFPPRPMGPWI 149
Query: 237 ERDHYVP--QYMQPP 249
+P +Y+ PP
Sbjct: 150 SMQEQIPRFRYIGPP 164
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 196 RAQYERPRPAHHIPNGDMYSRRSPAPMYSGRGGPAPV 232
R + ER R H Y + P P+Y G P P+
Sbjct: 68 RDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPI 104
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 196 RAQYERPRPAHHIPNGDMYSRRSPAPMYSGRGGPAPV 232
R + ER R H Y + P P+Y G P P+
Sbjct: 68 RDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPI 104
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 196 RAQYERPRPAHHIPNGDMYSRRSPAPMYSGRGGPAPV 232
R + ER R H Y + P P+Y G P P+
Sbjct: 68 RDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPI 104
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 196 RAQYERPRPAHHIPNGDMYSRRSPAPMYSGRGGPAPV 232
R + ER R H Y + P P+Y G P P+
Sbjct: 68 RDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPI 104
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 196 RAQYERPRPAHHIPNGDMYSRRSPAPMYSGRGGPAPV 232
R + ER R H Y + P P+Y G P P+
Sbjct: 68 RDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPI 104
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 196 RAQYERPRPAHHIPNGDMYSRRSPAPMYSGRGGPAPV 232
R + ER R H Y + P P+Y G P P+
Sbjct: 68 RDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPI 104
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 196 RAQYERPRPAHHIPNGDMYSRRSPAPMYSGRGGPAPV 232
R + ER R H Y + P P+Y G P P+
Sbjct: 68 RDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPI 104
>AY569719-1|AAS86672.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 196 RAQYERPRPAHHIPNGDMYSRRSPAPMYSGRGGPAPV 232
R + ER R H Y + P P+Y G P P+
Sbjct: 317 RDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPI 353
>AY569718-1|AAS86671.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 196 RAQYERPRPAHHIPNGDMYSRRSPAPMYSGRGGPAPV 232
R + ER R H Y + P P+Y G P P+
Sbjct: 317 RDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPI 353
>AY569715-1|AAS86668.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 196 RAQYERPRPAHHIPNGDMYSRRSPAPMYSGRGGPAPV 232
R + ER R H Y + P P+Y G P P+
Sbjct: 317 RDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPI 353
>AY569714-1|AAS86667.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 196 RAQYERPRPAHHIPNGDMYSRRSPAPMYSGRGGPAPV 232
R + ER R H Y + P P+Y G P P+
Sbjct: 317 RDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPI 353
>AY569713-1|AAS86666.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 196 RAQYERPRPAHHIPNGDMYSRRSPAPMYSGRGGPAPV 232
R + ER R H Y + P P+Y G P P+
Sbjct: 317 RDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPI 353
>AY569711-1|AAS86664.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 196 RAQYERPRPAHHIPNGDMYSRRSPAPMYSGRGGPAPV 232
R + ER R H Y + P P+Y G P P+
Sbjct: 317 RDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPI 353
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 196 RAQYERPRPAHHIPNGDMYSRRSPAPMYSGRGGPAPV 232
R + ER R H Y + P P+Y G P P+
Sbjct: 317 RDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPI 353
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 2.7
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVP--QYMQPP 249
P P+Y G P P+ +P +Y+ PP
Sbjct: 120 PVPIYCGNFPPRPMGPWISMQEQIPRFRYIGPP 152
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 2.7
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVP--QYMQPP 249
P P+Y G P P+ +P +Y+ PP
Sbjct: 120 PVPIYCGNFPPRPMGPWISMQEQIPRFRYIGPP 152
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 2.7
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVP--QYMQPP 249
P P+Y G P P+ +P +Y+ PP
Sbjct: 120 PVPIYCGNFPPRPMGPWISMQEQIPRFRYIGPP 152
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.7
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVP--QYMQPP 249
P P+Y G P P+ +P +Y+ PP
Sbjct: 122 PVPIYCGNFPPRPMGPWISMQEQIPRFRYIGPP 154
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.0 bits (47), Expect = 2.7
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVP--QYMQPP 249
P P+Y G P P+ +P +Y+ PP
Sbjct: 341 PVPIYCGNFPPRPMGPWISMQEQIPRFRYIGPP 373
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.5
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVP--QYMQPP 249
P P+Y G P P+ VP +Y+ PP
Sbjct: 122 PVPIYCGNFPPRPMGPWISIQEQVPRFRYIGPP 154
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.5
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVP--QYMQPP 249
P P+Y G P P+ VP +Y+ PP
Sbjct: 122 PVPIYCGNFPPRPMGPWISIQEQVPRFRYIGPP 154
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.5
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVP--QYMQPP 249
P P+Y G P P+ VP +Y+ PP
Sbjct: 122 PVPIYCGNFPPRPMGPWISIQEQVPRFRYIGPP 154
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.5
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVP--QYMQPP 249
P P+Y G P P+ VP +Y+ PP
Sbjct: 122 PVPIYCGNFPPRPMGPWISIQEQVPRFRYIGPP 154
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.5
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVP--QYMQPP 249
P P+Y G P P+ VP +Y+ PP
Sbjct: 122 PVPIYCGNFPPRPMGPWISIQEQVPRFRYIGPP 154
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 3.5
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVP--QYMQPP 249
P P+Y G P P+ VP +Y+ PP
Sbjct: 126 PVPIYCGNFPPRPMGPWISIQEQVPRFRYIGPP 158
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.5
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVP--QYMQPP 249
P P+Y G P P+ VP +Y+ PP
Sbjct: 122 PVPIYCGNFPPRPMGPWISIQEQVPRFRYIGPP 154
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.6 bits (46), Expect = 3.5
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVP--QYMQPP 249
P P+Y G P P+ +P +Y+ PP
Sbjct: 130 PVPVYYGNFPPRPMGPWISMQEQIPRFRYIGPP 162
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 3.5
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVP--QYMQPP 249
P P+Y G P P+ +P +Y+ PP
Sbjct: 120 PVPVYYGNFPPRPMGPWISMQEQIPRFRYIGPP 152
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 3.5
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVP--QYMQPP 249
P P+Y G P P+ +P +Y+ PP
Sbjct: 125 PVPVYYGNFPPRPMGPWISMQEQIPRFRYIGPP 157
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 3.5
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVP--QYMQPP 249
P P+Y G P P+ +P +Y+ PP
Sbjct: 125 PVPVYYGNFPPRPMGPWISMQEQIPRFRYIGPP 157
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 3.5
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVP--QYMQPP 249
P P+Y G P P+ +P +Y+ PP
Sbjct: 125 PVPVYYGNFPPRPMGPWISMQEQIPRFRYIGPP 157
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.6 bits (46), Expect = 3.5
Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Query: 177 VEGTRRYDEPPYDDRH--YDERAQYERPRPAHHIPNGDMYSRRSPAPMYSGRGGPAPVAG 234
+ Y+ Y++ + Y+ + ++I N + P P+Y G P P+
Sbjct: 323 IHNNNNYNNNNYNNNYNNYNNNNYNNYKKLYYNIINIEQIPVPVPVPIYCGNFPPRPMGP 382
Query: 235 GYERDHYVP--QYMQPP 249
+P +Y+ PP
Sbjct: 383 WISIQEQIPRFRYIGPP 399
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 22.6 bits (46), Expect = 3.5
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVP--QYMQPP 249
P P+Y G P P+ +P +Y+ PP
Sbjct: 355 PVPVYYGNFPPRPMGPWISMQEQIPRFRYIGPP 387
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.6 bits (46), Expect = 3.5
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVP--QYMQPP 249
P P+Y G P P+ +P +Y+ PP
Sbjct: 341 PVPIYYGNFPPRPMGPWISMQEQIPRFRYIGPP 373
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVP--QYMQPP 249
P P+Y G P P+ +P +Y+ PP
Sbjct: 121 PVPIYCGNFPPRPMGPWISIQEQIPRFRYIGPP 153
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVP--QYMQPP 249
P P+Y G P P+ +P +Y+ PP
Sbjct: 121 PVPIYCGNFPPRPMGPWISIQEQIPRFRYIGPP 153
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 4.7
Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 188 YDDRHYDERAQYERPRPAHHIPNGDMYSRRSPAPMYSGRGGPAPVAGGYERDHYVPQY 245
Y+ ++Y+ Y + ++I N + P P+Y G P P+ +P++
Sbjct: 309 YNYKNYNNN--YNSKKLYYNIINIEQIPVPVPVPIYCGNFPPRPMGPWISIQEQIPRF 364
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.7
Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 188 YDDRHYDERAQYERPRPAHHIPNGDMYSRRSPAPMYSGRGGPAPVAGGYERDHYVPQY 245
Y+ ++Y+ Y + ++I N + P P+Y G P P+ +P++
Sbjct: 320 YNYKNYNNN--YNSKKLYYNIINIEQIPVPVPVPIYCGNFPPRPMGPWISIQEQIPRF 375
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVP--QYMQPP 249
P P+Y G P P+ +P +Y+ PP
Sbjct: 359 PVPIYCGNFPPRPMGPWISIQEQIPRFRYIGPP 391
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVPQY 245
P P+Y G P P+ +P++
Sbjct: 122 PVPVYCGNFPPRPMGPWISMQEQIPRF 148
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVPQY 245
P P+Y G P P+ +P++
Sbjct: 122 PVPVYCGNFPPRPMGPWISMQEQIPRF 148
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVPQY 245
P P+Y G P P+ +P++
Sbjct: 122 PVPVYCGNFPPRPMGPWISMQEQIPRF 148
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVPQY 245
P P+Y G P P+ +P++
Sbjct: 122 PVPVYCGNFPPRPMGPWISMQEQIPRF 148
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVPQY 245
P P+Y G P P+ +P++
Sbjct: 122 PVPVYCGNFPPRPMGPWISMQEQIPRF 148
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVPQY 245
P P+Y G P P+ +P++
Sbjct: 122 PVPVYCGNFPPRPMGPWISMQEQIPRF 148
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVPQY 245
P P+Y G P P+ +P++
Sbjct: 122 PVPVYCGNFPPRPMGPWISMQEQIPRF 148
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVPQY 245
P P+Y G P P+ +P++
Sbjct: 122 PVPVYCGNFPPRPMGPWISMQEQIPRF 148
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVPQY 245
P P+Y G P P+ +P++
Sbjct: 122 PVPVYCGNFPPRPMGPWISMQEQIPRF 148
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVPQY 245
P P+Y G P P+ +P++
Sbjct: 355 PVPVYCGNFPPRPMGPWISMQEQIPRF 381
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 219 PAPMYSGRGGPAPVAGGYERDHYVPQY 245
P P+Y G P P+ +P++
Sbjct: 355 PVPVYCGNFPPRPMGPWISMQEQIPRF 381
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.319 0.140 0.443
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,492
Number of Sequences: 429
Number of extensions: 4178
Number of successful extensions: 75
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 39
Number of HSP's gapped (non-prelim): 56
length of query: 252
length of database: 140,377
effective HSP length: 56
effective length of query: 196
effective length of database: 116,353
effective search space: 22805188
effective search space used: 22805188
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 43 (21.4 bits)
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