GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004875-TA|BGIBMGA004875-PA|IPR003749|ThiamineS
         (91 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010315-1|AAQ23633.1| 1559|Drosophila melanogaster AT27514p pro...    27   4.2  
AY122153-1|AAM52665.1|  610|Drosophila melanogaster LD07634p pro...    27   4.2  
AJ002740-1|CAA05712.1|  609|Drosophila melanogaster capsuleen pr...    27   4.2  
AJ001164-1|CAA04568.1| 1668|Drosophila melanogaster Additional s...    27   4.2  
AF167574-1|AAF04504.1|  610|Drosophila melanogaster putative pro...    27   4.2  
AE013599-2233|AAF58030.1|  605|Drosophila melanogaster CG3730-PB...    27   4.2  
AE013599-2232|AAM68510.1|  610|Drosophila melanogaster CG3730-PA...    27   4.2  
AE013599-1903|AAX52705.1| 1560|Drosophila melanogaster CG8787-PB...    27   4.2  
AE013599-1902|AAF58239.1| 1669|Drosophila melanogaster CG8787-PA...    27   4.2  

>BT010315-1|AAQ23633.1| 1559|Drosophila melanogaster AT27514p
           protein.
          Length = 1559

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 39  YQRLLNIICDKYNLNSIKKNILLAKNEVVCEDTVD 73
           +Q L+N  CDK   +   K +++A  +V  ++ VD
Sbjct: 510 HQPLINSTCDKIEPSECSKEMIVAMKQVDSKEDVD 544


>AY122153-1|AAM52665.1|  610|Drosophila melanogaster LD07634p
           protein.
          Length = 610

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 3/42 (7%)

Query: 41  RLLNIICDKYNLNSIKKNILLAKNEVVCE--DTVDIEINEQD 80
           +L+N  CDK+ LNS  +N+L    + +C+  DT   E+ E D
Sbjct: 266 KLINDNCDKHMLNSY-ENMLEIPLQPLCDNLDTYTYEVFETD 306


>AJ002740-1|CAA05712.1|  609|Drosophila melanogaster capsuleen
           protein.
          Length = 609

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 3/42 (7%)

Query: 41  RLLNIICDKYNLNSIKKNILLAKNEVVCE--DTVDIEINEQD 80
           +L+N  CDK+ LNS  +N+L    + +C+  DT   E+ E D
Sbjct: 266 KLINDNCDKHMLNSY-ENMLEIPLQPLCDNLDTYTYEVFETD 306


>AJ001164-1|CAA04568.1| 1668|Drosophila melanogaster Additional sex
           combs protein.
          Length = 1668

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 39  YQRLLNIICDKYNLNSIKKNILLAKNEVVCEDTVD 73
           +Q L+N  CDK   +   K +++A  +V  ++ VD
Sbjct: 511 HQPLINSTCDKIEPSECSKEMIVAMKQVDSKEDVD 545


>AF167574-1|AAF04504.1|  610|Drosophila melanogaster putative
           protein methyltransferaseJBP1 protein.
          Length = 610

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 3/42 (7%)

Query: 41  RLLNIICDKYNLNSIKKNILLAKNEVVCE--DTVDIEINEQD 80
           +L+N  CDK+ LNS  +N+L    + +C+  DT   E+ E D
Sbjct: 266 KLINDNCDKHMLNSY-ENMLEIPLQPLCDNLDTYTYEVFETD 306


>AE013599-2233|AAF58030.1|  605|Drosophila melanogaster CG3730-PB,
           isoform B protein.
          Length = 605

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 3/42 (7%)

Query: 41  RLLNIICDKYNLNSIKKNILLAKNEVVCE--DTVDIEINEQD 80
           +L+N  CDK+ LNS  +N+L    + +C+  DT   E+ E D
Sbjct: 261 KLINDNCDKHMLNSY-ENMLEIPLQPLCDNLDTYTYEVFETD 301


>AE013599-2232|AAM68510.1|  610|Drosophila melanogaster CG3730-PA,
           isoform A protein.
          Length = 610

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 3/42 (7%)

Query: 41  RLLNIICDKYNLNSIKKNILLAKNEVVCE--DTVDIEINEQD 80
           +L+N  CDK+ LNS  +N+L    + +C+  DT   E+ E D
Sbjct: 266 KLINDNCDKHMLNSY-ENMLEIPLQPLCDNLDTYTYEVFETD 306


>AE013599-1903|AAX52705.1| 1560|Drosophila melanogaster CG8787-PB,
           isoform B protein.
          Length = 1560

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 39  YQRLLNIICDKYNLNSIKKNILLAKNEVVCEDTVD 73
           +Q L+N  CDK   +   K +++A  +V  ++ VD
Sbjct: 511 HQPLINSTCDKIEPSECSKEMIVAMKQVDSKEDVD 545


>AE013599-1902|AAF58239.1| 1669|Drosophila melanogaster CG8787-PA,
           isoform A protein.
          Length = 1669

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 39  YQRLLNIICDKYNLNSIKKNILLAKNEVVCEDTVD 73
           +Q L+N  CDK   +   K +++A  +V  ++ VD
Sbjct: 511 HQPLINSTCDKIEPSECSKEMIVAMKQVDSKEDVD 545


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.316    0.137    0.371 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,994,919
Number of Sequences: 52641
Number of extensions: 129572
Number of successful extensions: 274
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 270
Number of HSP's gapped (non-prelim): 9
length of query: 91
length of database: 24,830,863
effective HSP length: 70
effective length of query: 21
effective length of database: 21,145,993
effective search space: 444065853
effective search space used: 444065853
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
S2: 53 (25.4 bits)