GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004872-TA|BGIBMGA004872-PA|IPR011009|Protein
kinase-like, IPR006575|RWD, IPR000719|Protein kinase,
IPR008271|Serine/threonine protein kinase, active site,
IPR008266|Tyrosine protein kinase, active site, IPR001245|Tyrosine
protein kinase, IPR002290|Serine/threonine protein kinase
         (1564 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    61   6e-11
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    61   8e-11
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    55   5e-09
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    55   5e-09
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    54   7e-09
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                52   3e-08
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    38   6e-04
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    25   3.7  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    25   6.4  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    25   6.4  

>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 61.3 bits (142), Expect = 6e-11
 Identities = 54/178 (30%), Positives = 84/178 (47%), Gaps = 23/178 (12%)

Query: 737 FQEHFRAWRLFREIVEGLAHVHQRGMIHRDLKPVNIFLDSNDH---VKIGDFGLATKAFT 793
           F     A    ++I+E + H H  G++HRDLKP N+ L S      VK+ DFGLA     
Sbjct: 5   FYSEADASHCIQQILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLA----- 59

Query: 794 GLPVEDKTKQEEIGGSLTGQIGTALYVAPELLQSATKVIYNQKVDIYSLGIILFEMF--H 851
            + V+ + +      +  G  GT  Y++PE+L+   K  Y + VDI++ G+IL+ +   +
Sbjct: 60  -IEVQGEAQ------AWFGFAGTPGYLSPEVLK---KEPYGKPVDIWACGVILYILLVGY 109

Query: 852 PPL-ETGMERMMVLTNLRSKDIVIPNKFDVDENVKQIHVIRWLLNHEASLRPTCAELL 908
           PP  +    R+       S D   P    V    K  ++I  +L    S R T +E L
Sbjct: 110 PPFWDEDQHRLYAQIKTGSYDYPSPEWDTVTPEAK--NLINQMLTVNPSKRITASEAL 165



 Score = 27.1 bits (57), Expect = 1.2
 Identities = 8/30 (26%), Positives = 18/30 (60%)

Query: 370 HVADGVLSALNELHAANIIHRDVRSENVFV 399
           H    +L +++  H   ++HRD++ EN+ +
Sbjct: 13  HCIQQILESVHHCHHNGVVHRDLKPENLLL 42


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 60.9 bits (141), Expect = 8e-11
 Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 22/149 (14%)

Query: 713 KQVLYIQMEFCEKHTLRQAI-DNGLFQEHFRAWRLFRE-IVEGLAHVHQRGMIHRDLKPV 770
           ++ LY+ ME C    L   + D G F +     R +   +VE   ++H R +I+RDLKP 
Sbjct: 438 RKYLYMLMEACLGGELWTVLRDKGHFDDG--TTRFYTACVVEAFDYLHSRNIIYRDLKPE 495

Query: 771 NIFLDSNDHVKIGDFGLATKAFTGLPVEDKTKQEEIGGSLTGQIGTALYVAPELLQSATK 830
           N+ LDS  +VK+ DFG A             K+ + G       GT  YVAPE++ +   
Sbjct: 496 NLLLDSQGYVKLVDFGFA-------------KRLDHGRKTWTFCGTPEYVAPEVILNKG- 541

Query: 831 VIYNQKVDIYSLGIILFEMF--HPPLETG 857
             ++   D +SLG+++FE+    PP   G
Sbjct: 542 --HDISADYWSLGVLMFELLTGTPPFTGG 568



 Score = 44.8 bits (101), Expect = 6e-06
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 5/84 (5%)

Query: 333 KQCIYIFRSFVLGTSLKNLVKKLSGFSDCFEVLGLLRHVADGVLSALNELHAANIIHRDV 392
           ++ +Y+     LG  L  +++    F D     G  R     V+ A + LH+ NII+RD+
Sbjct: 438 RKYLYMLMEACLGGELWTVLRDKGHFDD-----GTTRFYTACVVEAFDYLHSRNIIYRDL 492

Query: 393 RSENVFVDDVGQVKLVGASLDTRL 416
           + EN+ +D  G VKLV      RL
Sbjct: 493 KPENLLLDSQGYVKLVDFGFAKRL 516


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 54.8 bits (126), Expect = 5e-09
 Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 19/99 (19%)

Query: 749 EIVEGLAHVHQRGMIHRDLKPVNIFLDSNDHVKIGDFGLATKAFTGLPVEDKTKQEEIGG 808
           +++EG+ ++H +G++HRD+K  N+ LD  +  K+ DFG        L            G
Sbjct: 705 DVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFCITEVMML------------G 752

Query: 809 SLTGQIGTALYVAPELLQSATKVIYNQKVDIYSLGIILF 847
           S+   +GT +++APELL       Y+  VD+Y+ GI+ +
Sbjct: 753 SI---VGTPVHMAPELLSGH----YDSSVDVYAFGILFW 784



 Score = 33.5 bits (73), Expect = 0.014
 Identities = 14/37 (37%), Positives = 23/37 (62%)

Query: 371 VADGVLSALNELHAANIIHRDVRSENVFVDDVGQVKL 407
           +A  VL  +  LH+  ++HRDV+ +NV +D   + KL
Sbjct: 702 IALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKL 738


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 54.8 bits (126), Expect = 5e-09
 Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 19/99 (19%)

Query: 749 EIVEGLAHVHQRGMIHRDLKPVNIFLDSNDHVKIGDFGLATKAFTGLPVEDKTKQEEIGG 808
           +++EG+ ++H +G++HRD+K  N+ LD  +  K+ DFG        L            G
Sbjct: 743 DVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFCITEVMML------------G 790

Query: 809 SLTGQIGTALYVAPELLQSATKVIYNQKVDIYSLGIILF 847
           S+   +GT +++APELL       Y+  VD+Y+ GI+ +
Sbjct: 791 SI---VGTPVHMAPELLSGH----YDSSVDVYAFGILFW 822



 Score = 33.5 bits (73), Expect = 0.014
 Identities = 14/37 (37%), Positives = 23/37 (62%)

Query: 371 VADGVLSALNELHAANIIHRDVRSENVFVDDVGQVKL 407
           +A  VL  +  LH+  ++HRDV+ +NV +D   + KL
Sbjct: 740 IALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKL 776


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 54.4 bits (125), Expect = 7e-09
 Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 2/80 (2%)

Query: 716 LYIQMEFCEKHTLRQAIDN-GLFQEHFRAWRLFREIVEGLAHVHQRGMIHRDLKPVNIFL 774
           LY  ME+     L   I   G F+E    +    EI  GL  +H RG+++RDLK  N+ L
Sbjct: 60  LYFVMEYVNGGDLMYQIQQCGKFKEPVAVFYA-SEIAIGLFFLHGRGIVYRDLKLDNVLL 118

Query: 775 DSNDHVKIGDFGLATKAFTG 794
           D + H+KI DFG+  +  +G
Sbjct: 119 DQDGHIKIADFGMCKEGISG 138



 Score = 31.1 bits (67), Expect = 0.074
 Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)

Query: 336 IYIFRSFVLGTSLKNLVKKLSGFSDCFEVLGLLRHVADGVLSALNELHAANIIHRDVRSE 395
           +Y    +V G  L   +++   F +   V       A  +   L  LH   I++RD++ +
Sbjct: 60  LYFVMEYVNGGDLMYQIQQCGKFKEPVAVF-----YASEIAIGLFFLHGRGIVYRDLKLD 114

Query: 396 NVFVDDVGQVKL 407
           NV +D  G +K+
Sbjct: 115 NVLLDQDGHIKI 126


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 52.4 bits (120), Expect = 3e-08
 Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 18/132 (13%)

Query: 718 IQMEFCEKHTLRQAIDNGLFQEHFRAWRLFREIVEGLAHVHQRGMIHRDLKPVNIFLDSN 777
           I ME C   TL+  +D  +  ++ R   + + I   L   H  G++H D+KP NI +  N
Sbjct: 134 ITMELCGT-TLQNRLDEAILIKNERIC-ILKSITCALQFCHNAGIVHADVKPKNILMSKN 191

Query: 778 DHVKIGDFGLATKAFTGLPVEDKTKQEEIGGSLTGQIGTALYVAPELLQSATKVIYNQKV 837
              K+ DFG  +    G P E           +    GT  Y APE+++           
Sbjct: 192 GQPKLTDFG--SSVLIGAPNE-----------IDKFYGTPGYTAPEVIKQNRP---TPAA 235

Query: 838 DIYSLGIILFEM 849
           DIYSLGI+ ++M
Sbjct: 236 DIYSLGIVAWQM 247



 Score = 31.5 bits (68), Expect = 0.056
 Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 13/82 (15%)

Query: 371 VADGVLSALNELHAANIIHRDVRSENVFVDDVGQVKLV--GASL----DTRLAEMLDNDN 424
           +   +  AL   H A I+H DV+ +N+ +   GQ KL   G+S+       + +      
Sbjct: 160 ILKSITCALQFCHNAGIVHADVKPKNILMSKNGQPKLTDFGSSVLIGAPNEIDKFYGTPG 219

Query: 425 YC-------DKQTPAQDIYATG 439
           Y        ++ TPA DIY+ G
Sbjct: 220 YTAPEVIKQNRPTPAADIYSLG 241


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 37.9 bits (84), Expect = 6e-04
 Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 20/191 (10%)

Query: 721 EFCEKHTLRQAI--DNGLFQEHFRAWRLFREIVEGLAHVHQRGMIHRDLKPVNIFLDSND 778
           EF E  +L   +  ++G FQ   +   + R I  G+ ++ +   +HRDL   N+ +++  
Sbjct: 714 EFMENGSLDTFLRANDGKFQV-LQLVGMLRGIASGMQYLAEMNYVHRDLAARNVLVNAAL 772

Query: 779 HVKIGDFGLATKAFTGLPVEDKTKQEEIGGSLTGQIGTALYVAPELLQSATKVIYNQKVD 838
             KI DFGL+ +  +       T+    GG +        + APE +       +    D
Sbjct: 773 VCKIADFGLSREIESATEGAYTTR----GGKI-----PVRWTAPEAIAFRK---FTSASD 820

Query: 839 IYSLGIILFEM--FHPPLETGMERMMVLTNLRSKDIVIPNKFDVDENVKQIHVIRWLLNH 896
           ++S+GI+ +E+  +            V+ ++  K   +P   D  E + Q+ +  W    
Sbjct: 821 VWSMGIVCWEVMSYGERPYWNWSNQDVIKSI-EKGYRLPAPMDCPEAIYQLMLDCW--QK 877

Query: 897 EASLRPTCAEL 907
           E + RPT A L
Sbjct: 878 ERTHRPTFANL 888



 Score = 26.2 bits (55), Expect = 2.1
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 7/71 (9%)

Query: 532 LDAEFEVL-AWLGKGAFGDVLKVKNKL--DGGF---YAIKRVQLNPESVQLNKKITREVK 585
           +DA +  + A +G G FGDV + K KL  DG      AIK ++        N  +T E  
Sbjct: 628 IDAGYITIEAIIGGGEFGDVCRGKLKLPPDGRTEIDVAIKTLKPGSADKARNDFLT-EAS 686

Query: 586 LLSRLNHENVV 596
           ++ +  H NV+
Sbjct: 687 IMGQFEHPNVI 697


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 25.4 bits (53), Expect = 3.7
 Identities = 11/20 (55%), Positives = 15/20 (75%)

Query: 678 SSELIEFEKTSDDEESQTLP 697
           SS+L E E +SD+EE+ T P
Sbjct: 311 SSDLSESETSSDEEEADTRP 330


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 24.6 bits (51), Expect = 6.4
 Identities = 12/41 (29%), Positives = 25/41 (60%), Gaps = 2/41 (4%)

Query: 552 KVKNKLDGGFYAIKRVQLNPE--SVQLNKKITREVKLLSRL 590
           KVKNK  G  + ++   L+PE   ++++K  ++ + + SR+
Sbjct: 328 KVKNKKAGSKHLLQNTWLDPEYPMIRVHKTQSQTIDIYSRI 368


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 24.6 bits (51), Expect = 6.4
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 6/69 (8%)

Query: 778 DHVKIGDFGLATKAFTGLPVE---DKTKQ--EEIGGSLTGQIGTALYVAPELLQSATKVI 832
           D  + GDF L  +  +G PVE   D  K   +    S T +I   L+V+   +++  K +
Sbjct: 48  DKFRSGDFSLKDEKRSGRPVEVDDDLIKAIIDSDRHSTTREIAEKLHVSHTCIENHLKQL 107

Query: 833 -YNQKVDIY 840
            Y QK+D +
Sbjct: 108 GYVQKLDTW 116


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.133    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 413,608
Number of Sequences: 429
Number of extensions: 17439
Number of successful extensions: 51
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 28
Number of HSP's gapped (non-prelim): 19
length of query: 1564
length of database: 140,377
effective HSP length: 67
effective length of query: 1497
effective length of database: 111,634
effective search space: 167116098
effective search space used: 167116098
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 50 (24.2 bits)