GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004871-TA|BGIBMGA004871-PA|undefined
         (372 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    25   0.79 
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    25   1.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    25   1.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    25   1.4  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    23   3.2  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    22   7.4  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   9.7  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 25.4 bits (53), Expect = 0.79
 Identities = 10/34 (29%), Positives = 22/34 (64%)

Query: 179 EIVQNEHYLNTSNNNRLIDRLIDFSEQLYNFLVS 212
           ++++ E   N+SN   L+D + DF+E++ +  +S
Sbjct: 300 QVLKRESIHNSSNARFLMDSMFDFAERVNSLRLS 333


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 25.0 bits (52), Expect = 1.0
 Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 2/26 (7%)

Query: 116 VQKDLNIDELSVNVIGSVPNSNNLVR 141
           V  D N DE++  ++G+  N NNL++
Sbjct: 390 VNNDFNFDEVNFRILGA--NVNNLIK 413


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)

Query: 181 VQNEHYLNTSNNNRLIDRLIDFSEQLYNFLVSGNATYTN-GFLVSIEKIDVTNM 233
           +QN  Y N S +++  D  IDF +++ +  +S     TN GFL   E ++V  +
Sbjct: 208 LQNRLYTNDSTSSKTDDDSIDF-DRMNSLGLSWLDQLTNLGFLGMKESVEVDQL 260


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)

Query: 181 VQNEHYLNTSNNNRLIDRLIDFSEQLYNFLVSGNATYTN-GFLVSIEKIDVTNM 233
           +QN  Y N S +++  D  IDF +++ +  +S     TN GFL   E ++V  +
Sbjct: 246 LQNRLYTNDSTSSKTDDDSIDF-DRMNSLGLSWLDQLTNLGFLGMKESVEVDQL 298


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 271 INDELRHYTGAFTHILVQYELNVHKNLVSGELHTSMRL--LSLMPSATVRMDYMPT 324
           I+D L + T   + IL  Y++ +  N     L   M L   S    + V MDY  T
Sbjct: 30  ISDRLENVTQTISRILDGYDIRLRPNFGGEPLLVGMDLTIASFDAISEVNMDYTIT 85


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 4/37 (10%)

Query: 212 SGNATYTNGFLVSIEKIDVTNMEQRVT----RDIVNG 244
           SGN   T   ++ I   + +N E RVT     +I+NG
Sbjct: 12  SGNWGSTIAKIIGINAANFSNFEDRVTMYVYEEIING 48


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 9.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 259 RDVKVGFDVDAHINDELRHY 278
           +DV V   +D HI + +R Y
Sbjct: 674 KDVDVTLPLDLHIQNAIREY 693


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.136    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,859
Number of Sequences: 429
Number of extensions: 4903
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 13
Number of HSP's gapped (non-prelim): 7
length of query: 372
length of database: 140,377
effective HSP length: 59
effective length of query: 313
effective length of database: 115,066
effective search space: 36015658
effective search space used: 36015658
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)