GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004869-TA|BGIBMGA004869-PA|IPR002919|Protease inhibitor
I8, cysteine-rich trypsin inhibitor-like
         (86 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               22   1.2  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              21   1.6  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   2.2  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   2.2  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   2.2  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   2.2  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              21   2.8  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        20   3.8  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        20   3.8  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        20   3.8  
EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholi...    19   6.6  
EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholi...    19   6.6  
EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholi...    19   6.6  
EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholi...    19   6.6  
EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholi...    19   6.6  
EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholi...    19   6.6  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    19   6.6  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    19   6.6  

>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 1.2
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 1  MKSFIVLLFVVAAVGYVTGQHFPTRKCPKGEH 32
          MK+ ++LLF +  V Y+  +      C K E+
Sbjct: 1  MKTIVILLFTLCIVSYMMVRCDDITLCLKQEN 32


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 1.6
 Identities = 7/24 (29%), Positives = 14/24 (58%)

Query: 1  MKSFIVLLFVVAAVGYVTGQHFPT 24
          MK+F+++  +   VG +T +   T
Sbjct: 1  MKTFVIIFAICVCVGAMTHEELKT 24


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 2.2
 Identities = 9/20 (45%), Positives = 10/20 (50%)

Query: 26  KCPKGEHSVLYCPQMAEPDC 45
           KC K EH V  C +  E  C
Sbjct: 122 KCYKLEHPVTGCGERTEGRC 141


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.0 bits (42), Expect = 2.2
 Identities = 9/20 (45%), Positives = 10/20 (50%)

Query: 26  KCPKGEHSVLYCPQMAEPDC 45
           KC K EH V  C +  E  C
Sbjct: 127 KCYKLEHPVTGCGERTEGRC 146


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.0 bits (42), Expect = 2.2
 Identities = 9/20 (45%), Positives = 10/20 (50%)

Query: 26  KCPKGEHSVLYCPQMAEPDC 45
           KC K EH V  C +  E  C
Sbjct: 127 KCYKLEHPVTGCGERTEGRC 146


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 2.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)

Query: 60  CDVPQCFCDRPNVRNTK 76
           C V     DRP +RNT+
Sbjct: 341 CSVVVIAADRPGLRNTE 357


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 2.8
 Identities = 7/22 (31%), Positives = 14/22 (63%)

Query: 1  MKSFIVLLFVVAAVGYVTGQHF 22
          MK+F+++  +   VG +T + F
Sbjct: 1  MKTFVIISAICVCVGALTLEEF 22


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 3.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)

Query: 45  CENPEVHDFVD 55
           CE PEV D+ D
Sbjct: 222 CEKPEVCDYPD 232


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 3.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)

Query: 45  CENPEVHDFVD 55
           CE PEV D+ D
Sbjct: 222 CEKPEVCDYPD 232


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 3.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)

Query: 45  CENPEVHDFVD 55
           CE PEV D+ D
Sbjct: 222 CEKPEVCDYPD 232


>EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 6 protein.
          Length = 461

 Score = 19.4 bits (38), Expect = 6.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)

Query: 70  PNVRNTKTGKCVPE 83
           P  +NT T +C PE
Sbjct: 166 PGKKNTITYQCCPE 179


>EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 5 protein.
          Length = 461

 Score = 19.4 bits (38), Expect = 6.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)

Query: 70  PNVRNTKTGKCVPE 83
           P  +NT T +C PE
Sbjct: 166 PGKKNTITYQCCPE 179


>EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 4 protein.
          Length = 461

 Score = 19.4 bits (38), Expect = 6.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)

Query: 70  PNVRNTKTGKCVPE 83
           P  +NT T +C PE
Sbjct: 166 PGKKNTITYQCCPE 179


>EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 3 protein.
          Length = 461

 Score = 19.4 bits (38), Expect = 6.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)

Query: 70  PNVRNTKTGKCVPE 83
           P  +NT T +C PE
Sbjct: 166 PGKKNTITYQCCPE 179


>EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 2 protein.
          Length = 461

 Score = 19.4 bits (38), Expect = 6.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)

Query: 70  PNVRNTKTGKCVPE 83
           P  +NT T +C PE
Sbjct: 166 PGKKNTITYQCCPE 179


>EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 1 protein.
          Length = 461

 Score = 19.4 bits (38), Expect = 6.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)

Query: 70  PNVRNTKTGKCVPE 83
           P  +NT T +C PE
Sbjct: 166 PGKKNTITYQCCPE 179


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 19.4 bits (38), Expect = 6.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)

Query: 70  PNVRNTKTGKCVPE 83
           P  +NT T +C PE
Sbjct: 234 PGKKNTITYQCCPE 247


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 19.4 bits (38), Expect = 6.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)

Query: 70  PNVRNTKTGKCVPE 83
           P  +NT T +C PE
Sbjct: 234 PGKKNTITYQCCPE 247


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.324    0.141    0.482 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,223
Number of Sequences: 429
Number of extensions: 1011
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of query: 86
length of database: 140,377
effective HSP length: 48
effective length of query: 38
effective length of database: 119,785
effective search space:  4551830
effective search space used:  4551830
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (20.1 bits)
S2: 37 (19.0 bits)