Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004856-TA|BGIBMGA004856-PA|undefined
(303 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.63
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.63
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.63
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.63
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.63
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.63
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 25 0.63
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 25 0.63
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 24 1.4
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 24 1.9
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 24 1.9
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 2.5
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 22 7.7
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 25.4 bits (53), Expect = 0.63
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 189 REKEAEIDPLAPYLARMFGSGHGSGNPLTVKEAT 222
R K + +P + Y+ FG+ +G P TV++ +
Sbjct: 353 RHKNSAANPPSGYIRSAFGTPISTGRPATVEDTS 386
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 25.4 bits (53), Expect = 0.63
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 189 REKEAEIDPLAPYLARMFGSGHGSGNPLTVKEAT 222
R K + +P + Y+ FG+ +G P TV++ +
Sbjct: 353 RHKNSAANPPSGYIRSAFGTPISTGRPATVEDTS 386
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 25.4 bits (53), Expect = 0.63
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 189 REKEAEIDPLAPYLARMFGSGHGSGNPLTVKEAT 222
R K + +P + Y+ FG+ +G P TV++ +
Sbjct: 353 RHKNSAANPPSGYIRSAFGTPISTGRPATVEDTS 386
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 25.4 bits (53), Expect = 0.63
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 189 REKEAEIDPLAPYLARMFGSGHGSGNPLTVKEAT 222
R K + +P + Y+ FG+ +G P TV++ +
Sbjct: 353 RHKNSAANPPSGYIRSAFGTPISTGRPATVEDTS 386
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 25.4 bits (53), Expect = 0.63
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 189 REKEAEIDPLAPYLARMFGSGHGSGNPLTVKEAT 222
R K + +P + Y+ FG+ +G P TV++ +
Sbjct: 353 RHKNSAANPPSGYIRSAFGTPISTGRPATVEDTS 386
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 25.4 bits (53), Expect = 0.63
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 189 REKEAEIDPLAPYLARMFGSGHGSGNPLTVKEAT 222
R K + +P + Y+ FG+ +G P TV++ +
Sbjct: 353 RHKNSAANPPSGYIRSAFGTPISTGRPATVEDTS 386
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.4 bits (53), Expect = 0.63
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 189 REKEAEIDPLAPYLARMFGSGHGSGNPLTVKEAT 222
R K + +P + Y+ FG+ +G P TV++ +
Sbjct: 421 RHKNSAANPPSGYIRSAFGTPISTGRPATVEDTS 454
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.4 bits (53), Expect = 0.63
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 189 REKEAEIDPLAPYLARMFGSGHGSGNPLTVKEAT 222
R K + +P + Y+ FG+ +G P TV++ +
Sbjct: 421 RHKNSAANPPSGYIRSAFGTPISTGRPATVEDTS 454
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 24.2 bits (50), Expect = 1.4
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 33 LTFDEYYSNRSDRLESGLVIYTEGTKETKRQIKDVTETYSRNHEIPSK 80
L F + + D+L + + Y E KE K ++ +TY H P++
Sbjct: 884 LKFFPFDKHILDKLPTLISNYIEAVKEGKFMNVNMLDTYESVHSFPTE 931
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 23.8 bits (49), Expect = 1.9
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 54 TEGTKETKRQIKDVTETYSRNHE 76
TE K+ KR++ D T NHE
Sbjct: 430 TEPKKDNKRKLSDSTMNKINNHE 452
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.8 bits (49), Expect = 1.9
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 165 DTEKNEAAKKGWKEQEAKKAEVTEREKEAEIDPL 198
D E+NE + G + EA+K + + + + PL
Sbjct: 282 DDEENEEEEDGRGQSEAEKRLKLDEDADGAVSPL 315
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.4 bits (48), Expect = 2.5
Identities = 17/75 (22%), Positives = 30/75 (40%)
Query: 62 RQIKDVTETYSRNHEIPSKQDVWKKIFHLQDNTIELLYQYAYNYADPNAKQPRDLEVYYA 121
R+ ++ ++ SR+ + K I L + TI Y YNY + N Y
Sbjct: 290 RKYRETSKERSRDRTERERSREPKIISSLSNKTIHNNNNYKYNYNNNNYNNNNYNNNYNN 349
Query: 122 LCENMEWEHATTKQI 136
C+ + + +QI
Sbjct: 350 NCKKLYYNIINIEQI 364
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 21.8 bits (44), Expect = 7.7
Identities = 9/16 (56%), Positives = 9/16 (56%)
Query: 210 HGSGNPLTVKEATLIR 225
HG G P VK LIR
Sbjct: 56 HGKGTPTVVKTNILIR 71
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.318 0.132 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,864
Number of Sequences: 429
Number of extensions: 4196
Number of successful extensions: 25
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 13
length of query: 303
length of database: 140,377
effective HSP length: 57
effective length of query: 246
effective length of database: 115,924
effective search space: 28517304
effective search space used: 28517304
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)
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