GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004830-TA|BGIBMGA004830-PA|IPR000834|Peptidase M14,
carboxypeptidase A, IPR000276|Rhodopsin-like GPCR superfamily,
IPR009020|Proteinase inhibitor, propeptide
         (670 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    46   8e-07
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    43   7e-06
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    43   9e-06
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    36   0.001
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    33   0.006
AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength rhodo...    33   0.006
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    31   0.040
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    31   0.040
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    30   0.053
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    27   0.66 
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    26   1.1  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    25   2.0  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    24   4.6  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   8.1  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 46.4 bits (105), Expect = 8e-07
 Identities = 25/108 (23%), Positives = 57/108 (52%), Gaps = 4/108 (3%)

Query: 15  TYLLLGNVSLADTIVGFSLI-FGMSMENT---ISSNVLCIFQIGMLACPVMVSLFSVGLI 70
           T + + ++++AD +VG +++ F  + E     I  ++ C   + +       S+ ++  I
Sbjct: 100 TNMFIVSLAVADLMVGLAVLPFSATWEVFKVWIFGDLWCSIWLAVDVWMCTASILNLCAI 159

Query: 71  AVDRYIYILHGLYYGRWFNTKRVRIGILCTWIISLTLGFLPATGWKNE 118
           ++DRY+ +   + Y +  + +R R+ +   WI+S  + F P  GWK++
Sbjct: 160 SLDRYLAVTRPVSYPQIMSPRRARLLVATVWILSFVICFPPLVGWKDK 207


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 43.2 bits (97), Expect = 7e-06
 Identities = 23/70 (32%), Positives = 35/70 (50%)

Query: 48  LCIFQIGMLACPVMVSLFSVGLIAVDRYIYILHGLYYGRWFNTKRVRIGILCTWIISLTL 107
           +C F I M       S+F++  I++DRYI +   + Y +  N +RV + IL  W IS  +
Sbjct: 258 VCDFYIAMDVTCSTSSIFNLVAISIDRYIAVTQPIKYAKHKNNRRVWLTILLVWAISAAI 317

Query: 108 GFLPATGWKN 117
           G     G  N
Sbjct: 318 GSPIVLGLNN 327


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 42.7 bits (96), Expect = 9e-06
 Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 6/100 (6%)

Query: 17  LLLGNVSLADTIVGFSLIFGMSMENTISSNVL----CIFQIGMLACPVMVSLFSVGLIAV 72
           L L ++++AD  VG  ++    + + +   V     C   I         S+ ++  I++
Sbjct: 62  LFLASLAIADLFVGCLVMTFAGVNDLLGYWVFGPRFCDTWIAFDVMCSTASILNLCAISL 121

Query: 73  DRYIYILHGLYYGRWFNTKRVRI-GILCTWIISLTLGFLP 111
           DRYI+I   L YGRW  T+R+ + GI   W+++  + F+P
Sbjct: 122 DRYIHIKDPLRYGRWV-TRRIAVAGIAVVWLLAGLISFVP 160


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 35.5 bits (78), Expect = 0.001
 Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 5/70 (7%)

Query: 56  LACPVM---VSLFSVGLIAVDRYIYILHGLYYGRWFNTKRVRIGILCTWIISLTLGFLPA 112
           L C V+    S+ ++  IA+DRY  I   + Y +    KRV   I   WI+S  +   P 
Sbjct: 113 LTCDVLCCTASILNLCAIALDRYWAITDPINYAQKRTLKRVLATIAGVWILSGAISSPPL 172

Query: 113 TGWKN--EEL 120
            GW +  EEL
Sbjct: 173 AGWNDWPEEL 182


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 33.5 bits (73), Expect = 0.006
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 63  SLFSVGLIAVDRYIYILHGLYYGRWFNTKRVRIGILCTWIISLTLGFLPATGW 115
           S++++ +IA DRY  I+ GL  G+  +     I I+  W+ SL     P  GW
Sbjct: 139 SIWTMTMIAFDRYNVIVKGLS-GKPLSINGALIRIIAIWLFSLGWTIAPMFGW 190


>AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 154

 Score = 33.5 bits (73), Expect = 0.006
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 63  SLFSVGLIAVDRYIYILHGLYYGRWFNTKRVRIGILCTWIISLTLGFLPATGW 115
           S++++ +IA DRY  I+ GL  G+  +     I I+  W+ SL     P  GW
Sbjct: 15  SIWTMTMIAFDRYNVIVKGLS-GKPLSINGALIRIIAIWLFSLGWTIAPMFGW 66


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 30.7 bits (66), Expect = 0.040
 Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 1/69 (1%)

Query: 47  VLCIFQIGMLACPVMVSLFSVGLIAVDRYIYILHGLYYGRWFNTKRVR-IGILCTWIISL 105
           +LC   + +       S+ S+  I++DRY+ +   L Y R   +KR+  + I+  W+++ 
Sbjct: 109 MLCDSWVSLDILLCTASILSLCAISIDRYLAVTQPLIYSRRRRSKRLAGLMIVAVWVLAG 168

Query: 106 TLGFLPATG 114
            +   P  G
Sbjct: 169 AITSPPLLG 177


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 30.7 bits (66), Expect = 0.040
 Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 6/106 (5%)

Query: 18  LLGNVSLADTIVGFSLIFGMSMENTISSN-----VLCIFQIGMLACPVMVSLFSVGLIAV 72
           LL +++++D  V   L+  M++   IS N     ++C   +         S+ ++ +I+V
Sbjct: 79  LLVSLAVSDLCVAL-LVMPMALLYEISGNWSFGTIMCDLWVSFDVLSCTASILNLCMISV 137

Query: 73  DRYIYILHGLYYGRWFNTKRVRIGILCTWIISLTLGFLPATGWKNE 118
           DR+  I   L YG     +R+ + +   W+ +  +   P     NE
Sbjct: 138 DRFCAITKPLKYGVKRTPRRMIVYVSLVWLGAACISLPPLLIMGNE 183


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 30.3 bits (65), Expect = 0.053
 Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 10/121 (8%)

Query: 14  STYLLLGNVSLADTIVG-----FSLIFGMSMENTISSNVLCIFQIGMLACPVMVSLFSVG 68
           +T   + +++ AD +VG     FS I+ +     + +   C     +       S+ ++ 
Sbjct: 79  ATNYFVTSLAFADCLVGLVVMPFSAIYEVLENRWLFTTDWCDVWRSLDVLFSTASILNLC 138

Query: 69  LIAVDRYIYILHGLYYGRWFNTKRVRIGILCTWIISLTLGFLPATGW----KNEELLYTR 124
           +I++DRY  I     Y    + +R  + I   WI S  + F PA  W    + EE+   +
Sbjct: 139 VISLDRYWAITDPFTYPSKMSRRRAAVLIAIVWICSSAISF-PAIVWWRAVRTEEVPEDK 197

Query: 125 C 125
           C
Sbjct: 198 C 198


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 26.6 bits (56), Expect = 0.66
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 62  VSLFSVGLIAVDRYIYILHGLYYGRWFNTKRVRIGILCTWIISLTLGFLPAT 113
           VS+ ++   +++RY+ I H L + R    KR    I   W+I+L      AT
Sbjct: 120 VSVLTIVAFSIERYLAIYHPLRHYR-SGLKRAIRSIFGAWLIALIFAMPFAT 170


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 62  VSLFSVGLIAVDRYIYILHGLYYGRWFNTKRVRIGILCTWIISL 105
           VS+ ++   +++RY+ I H L        KR    IL  W+I+L
Sbjct: 127 VSVLTIVAFSMERYLAICHPLRVYTISGLKRPIRFILAAWLIAL 170


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 14/65 (21%), Positives = 24/65 (36%)

Query: 43  ISSNVLCIFQIGMLACPVMVSLFSVGLIAVDRYIYILHGLYYGRWFNTKRVRIGILCTWI 102
           +     CI Q          ++ ++    V+RYI I H           R    I+  W+
Sbjct: 121 VFGEAFCIIQSFAAETSANATVLTITAFTVERYIAICHPFISHTMSKLSRAVKFIIVIWL 180

Query: 103 ISLTL 107
           ++L L
Sbjct: 181 LALCL 185


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 537 IIRDVALQNVDRAALYISLHSYGNMFLYAWGNNGS 571
           ++ DV   N D    YIS  S   + +Y+W  N S
Sbjct: 175 LVIDVDPNNCDNTYAYISDLSGYALVVYSWAKNDS 209


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)

Query: 244 TSDNANILHDYRDSKNNDGRTHESGHESNH 273
           +SD+A +L D   +K  DG     G+ES+H
Sbjct: 247 SSDSA-VLSDEDQTKGWDGSNMVEGNESDH 275


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.137    0.418 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,760
Number of Sequences: 429
Number of extensions: 7870
Number of successful extensions: 25
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 14
length of query: 670
length of database: 140,377
effective HSP length: 62
effective length of query: 608
effective length of database: 113,779
effective search space: 69177632
effective search space used: 69177632
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 47 (23.0 bits)