GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004829-TA|BGIBMGA004829-PA|undefined
         (165 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    25   0.29 
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    25   0.29 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   3.6  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 25.4 bits (53), Expect = 0.29
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 94  TTRTQHLSSVSTHRRLRAALATITQHSAQFRLTANFE 130
           T R+ +LS +  H   R  +    Q  A ++LT N E
Sbjct: 324 TRRSLYLSDIPLHDATRDLVLMSEQFEADYKLTRNLE 360


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 25.4 bits (53), Expect = 0.29
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 94  TTRTQHLSSVSTHRRLRAALATITQHSAQFRLTANFE 130
           T R+ +LS +  H   R  +    Q  A ++LT N E
Sbjct: 324 TRRSLYLSDIPLHDATRDLVLMSEQFEADYKLTRNLE 360


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 18  NPRILADKSTSLTVVPQQASIAASTGPSQ 46
           NPRI +  S+S +  P     AA+  PS+
Sbjct: 514 NPRIASAPSSSTSSSPPAKGAAAAGQPSK 542


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.127    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,335
Number of Sequences: 429
Number of extensions: 1926
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 165
length of database: 140,377
effective HSP length: 53
effective length of query: 112
effective length of database: 117,640
effective search space: 13175680
effective search space used: 13175680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 41 (20.6 bits)