GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004817-TA|BGIBMGA004817-PA|undefined
         (66 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    19   5.1  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         19   6.7  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    19   6.7  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    19   6.7  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 19.0 bits (37), Expect = 5.1
 Identities = 8/19 (42%), Positives = 11/19 (57%)

Query: 46  GAAPPPITKSLYNERTSTE 64
           G A  P+T +LY    S+E
Sbjct: 254 GMALSPVTHNLYYNSPSSE 272


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 18.6 bits (36), Expect = 6.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)

Query: 40  ASDVAGGAAPPPITKSLY 57
           A D   G A  P+T +LY
Sbjct: 249 AQDGISGMALSPMTNNLY 266


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 18.6 bits (36), Expect = 6.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)

Query: 40  ASDVAGGAAPPPITKSLY 57
           A D   G A  P+T +LY
Sbjct: 249 AQDGISGMALSPMTNNLY 266


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 18.6 bits (36), Expect = 6.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)

Query: 40  ASDVAGGAAPPPITKSLY 57
           A D   G A  P+T +LY
Sbjct: 249 AQDGISGMALSPMTNNLY 266


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.307    0.124    0.341 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,192
Number of Sequences: 429
Number of extensions: 114
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 66
length of database: 140,377
effective HSP length: 44
effective length of query: 22
effective length of database: 121,501
effective search space:  2673022
effective search space used:  2673022
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.5 bits)
S2: 35 (18.2 bits)