GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004806-TA|BGIBMGA004806-PA|IPR002345|Lipocalin,
IPR000566|Lipocalin-related protein and Bos/Can/Equ allergen,
IPR013208|Lipocalin-like, IPR005657|Triabin, pallidipin and procalin,
IPR002969|Apolipoprotein D, IPR011038|Calycin-like
         (2841 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    26   3.8  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    25   8.9  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    25   8.9  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    25   8.9  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    25   8.9  

>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 26.2 bits (55), Expect = 3.8
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%)

Query: 1795 ACNEATYTLNSDNTITVFNTKVLN---QNLNTITGTATLAADGSAKLL 1839
            A NE TYT  SD+  T+   +V++   QN  TI  T +  AD     L
Sbjct: 140  AINETTYTDGSDDYSTLIRVRVIDVRPQN-ETILTTVSSEADSDVTTL 186


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
            precursor protein.
          Length = 175

 Score = 25.0 bits (52), Expect = 8.9
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 4/46 (8%)

Query: 1797 NEATYTLNSDNTITVFNTKVLN---QNLNTITGTATLAADGSAKLL 1839
            NE TYT  SD+  T+   +V++   QN  TI  T +  AD     L
Sbjct: 94   NETTYTDGSDDYSTLIRVRVIDVRPQN-ETILTTVSSEADSDVTTL 138


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
            precursor protein.
          Length = 223

 Score = 25.0 bits (52), Expect = 8.9
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 4/46 (8%)

Query: 1797 NEATYTLNSDNTITVFNTKVLN---QNLNTITGTATLAADGSAKLL 1839
            NE TYT  SD+  T+   +V++   QN  TI  T +  AD     L
Sbjct: 142  NETTYTDGSDDYSTLIRVRVIDVRPQN-ETILTTVSSEADSDVTTL 186


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
            protein precursor protein.
          Length = 223

 Score = 25.0 bits (52), Expect = 8.9
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 4/46 (8%)

Query: 1797 NEATYTLNSDNTITVFNTKVLN---QNLNTITGTATLAADGSAKLL 1839
            NE TYT  SD+  T+   +V++   QN  TI  T +  AD     L
Sbjct: 142  NETTYTDGSDDYSTLIRVRVIDVRPQN-ETILTTVSSEADSDVTTL 186


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 25.0 bits (52), Expect = 8.9
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 5/44 (11%)

Query: 1095 SSNVNGKTLNTNTGTVSFTSTDGSARLSISINVD-GQVITIPYW 1137
            SSNVN  + N NT +   ++ D S  +  SI+VD G + T+  W
Sbjct: 535  SSNVNNNSGNGNTNS---SARDSSPAIE-SISVDSGSINTVAEW 574


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.132    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 807,310
Number of Sequences: 429
Number of extensions: 35561
Number of successful extensions: 70
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 69
Number of HSP's gapped (non-prelim): 5
length of query: 2841
length of database: 140,377
effective HSP length: 70
effective length of query: 2771
effective length of database: 110,347
effective search space: 305771537
effective search space used: 305771537
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)