GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004805-TA|BGIBMGA004805-PA|IPR011038|Calycin-like,
IPR002345|Lipocalin
         (123 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        27   0.046
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        27   0.046
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        27   0.046
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   1.7  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    20   9.3  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 27.5 bits (58), Expect = 0.046
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 6/49 (12%)

Query: 20  ASYASDGRPIYDCATLDFQEDNLGYTLRETYVN---VDGGN--RTQKSY 63
           A+Y+ D RP YDC TL+  +D+    ++E   +   V GG+  R  K Y
Sbjct: 405 AAYSRDVRPKYDC-TLEKSQDDCLKAIKENNADLTVVSGGSVLRATKEY 452


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 27.5 bits (58), Expect = 0.046
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 6/49 (12%)

Query: 20  ASYASDGRPIYDCATLDFQEDNLGYTLRETYVN---VDGGN--RTQKSY 63
           A+Y+ D RP YDC TL+  +D+    ++E   +   V GG+  R  K Y
Sbjct: 405 AAYSRDVRPKYDC-TLEKSQDDCLKAIKENNADLTVVSGGSVLRATKEY 452


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 27.5 bits (58), Expect = 0.046
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 6/49 (12%)

Query: 20  ASYASDGRPIYDCATLDFQEDNLGYTLRETYVN---VDGGN--RTQKSY 63
           A+Y+ D RP YDC TL+  +D+    ++E   +   V GG+  R  K Y
Sbjct: 405 AAYSRDVRPKYDC-TLEKSQDDCLKAIKENNADLTVVSGGSVLRATKEY 452


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 1/17 (5%)

Query: 108 YTC-KTLKKKTRTHYGQ 123
           +TC K LK  TRTH G+
Sbjct: 213 FTCSKQLKVHTRTHTGE 229


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 19.8 bits (39), Expect = 9.3
 Identities = 8/22 (36%), Positives = 11/22 (50%)

Query: 102 DEYAIAYTCKTLKKKTRTHYGQ 123
           D+  I   CKT   KT+  + Q
Sbjct: 429 DDPPIGCECKTCNSKTKCCFAQ 450


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.136    0.411 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,393
Number of Sequences: 429
Number of extensions: 1370
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 123
length of database: 140,377
effective HSP length: 51
effective length of query: 72
effective length of database: 118,498
effective search space:  8531856
effective search space used:  8531856
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
S2: 39 (19.8 bits)