GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004804-TA|BGIBMGA004804-PA|IPR011038|Calycin-like,
IPR013208|Lipocalin-like
         (204 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   2.7  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   2.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   8.2  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 67  YCNRKVEIEQ-VFIRDGIRFIIHRNSSYNPGDEAIFD 102
           + +R ++++  + +  GI   +HRNS+   G   IFD
Sbjct: 279 FSHRSIDVKDGIVLATGIT--VHRNSAQQAGVGTIFD 313


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 67  YCNRKVEIEQ-VFIRDGIRFIIHRNSSYNPGDEAIFD 102
           + +R ++++  + +  GI   +HRNS+   G   IFD
Sbjct: 279 FSHRSIDVKDGIVLATGIT--VHRNSAQQAGVGTIFD 313


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/22 (45%), Positives = 11/22 (50%)

Query: 64  RFQYCNRKVEIEQVFIRDGIRF 85
           R QYC  K  I     RD +RF
Sbjct: 119 RCQYCRLKKCIAVGMSRDAVRF 140


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.324    0.140    0.448 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,838
Number of Sequences: 429
Number of extensions: 3210
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 3
length of query: 204
length of database: 140,377
effective HSP length: 55
effective length of query: 149
effective length of database: 116,782
effective search space: 17400518
effective search space used: 17400518
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 42 (21.0 bits)