GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004802-TA|BGIBMGA004802-PA|undefined
         (213 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    24   0.94 
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           24   0.94 
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    22   5.0  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   6.6  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 10/23 (43%), Positives = 16/23 (69%), Gaps = 2/23 (8%)

Query: 11  EASTNAVWTRRDVWSNFNHNKNK 33
           ++STN  + R D W++ N N+NK
Sbjct: 536 DSSTN--FGREDFWNSINFNENK 556


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 10/23 (43%), Positives = 16/23 (69%), Gaps = 2/23 (8%)

Query: 11  EASTNAVWTRRDVWSNFNHNKNK 33
           ++STN  + R D W++ N N+NK
Sbjct: 536 DSSTN--FGREDFWNSINFNENK 556


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/37 (27%), Positives = 16/37 (43%)

Query: 28  NHNKNKERGLKQQNADSGKNQAKYETEREAINVIATA 64
           NH K      K+ N DS ++ A   ++   I +   A
Sbjct: 240 NHEKALREQAKKMNVDSLRSNANTSSQSAEIRIAKAA 276


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/22 (36%), Positives = 14/22 (63%)

Query: 27  FNHNKNKERGLKQQNADSGKNQ 48
           F  NK +E+ + ++N+D   NQ
Sbjct: 159 FKQNKEEEQTINRKNSDYLDNQ 180


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.309    0.125    0.363 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,439
Number of Sequences: 429
Number of extensions: 2438
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 213
length of database: 140,377
effective HSP length: 55
effective length of query: 158
effective length of database: 116,782
effective search space: 18451556
effective search space used: 18451556
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 42 (21.0 bits)