GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004800-TA|BGIBMGA004800-PA|IPR000834|Peptidase M14,
carboxypeptidase A
         (344 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    25   1.3  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    25   1.3  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   5.1  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    22   8.9  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   8.9  
AB248729-1|BAF02606.1|   43|Apis mellifera distal-less protein.        22   8.9  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   8.9  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 177 KNWNSQWGIIGGSFTP 192
           + WNS WGI+G    P
Sbjct: 334 QQWNSYWGILGFPSAP 349


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 177 KNWNSQWGIIGGSFTP 192
           + WNS WGI+G    P
Sbjct: 334 QQWNSYWGILGFPSAP 349


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 1/57 (1%)

Query: 55  YDWFNYLAETRSDIVSVVTIGQSYEGRNITGIKIARGTGKKAFVLEGGQVGADWLSP 111
           +D  NY++E   DI+    +G S   R+    + A    K   +L        WL P
Sbjct: 176 FDCHNYMSELTVDILLETAMGVSKPTRDHNAFEYAMAVMKMCDILHLRHTKI-WLRP 231


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 9/36 (25%), Positives = 14/36 (38%)

Query: 138 WHIFPIVNPDGHQFTQDSVRLWVKNRRPTTRTTIGV 173
           +H+F    P         +  W+K      R T+GV
Sbjct: 215 YHLFHTYIPSALIVVMSWIAFWIKPEAIPARVTLGV 250


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 265 VRYGTLYITGTSRLVHSGNTGAA 287
           +RY  L + G S  VH G  G A
Sbjct: 236 LRYSELAVAGESFTVHDGIFGMA 258


>AB248729-1|BAF02606.1|   43|Apis mellifera distal-less protein.
          Length = 43

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)

Query: 152 TQDSVRLWVKNRR 164
           TQ  V++W +NRR
Sbjct: 21  TQTQVKIWFQNRR 33


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query: 47  NYQTIEDIYDWFNY 60
           NY  +EDIY+  +Y
Sbjct: 117 NYNLLEDIYETLSY 130


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.136    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,564
Number of Sequences: 429
Number of extensions: 3621
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 7
length of query: 344
length of database: 140,377
effective HSP length: 58
effective length of query: 286
effective length of database: 115,495
effective search space: 33031570
effective search space used: 33031570
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)