Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004792-TA|BGIBMGA004792-PA|IPR001092|Basic
helix-loop-helix dimerisation region bHLH
(286 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8CQA8 Cluster: Surfactin synthetase; n=14; Staphylococ... 36 0.90
UniRef50_Q5DDL1 Cluster: SJCHGC03901 protein; n=1; Schistosoma j... 36 1.6
UniRef50_Q0TRY8 Cluster: Lysine-N-methylase-like protein; n=3; C... 35 2.1
UniRef50_Q6MF19 Cluster: Phosphorylase; n=1; Candidatus Protochl... 35 2.7
UniRef50_Q0HIH2 Cluster: Transcriptional regulator, LysR family;... 35 2.7
UniRef50_Q0ZAE9 Cluster: SNARE protein; n=6; Plasmodium|Rep: SNA... 34 3.6
UniRef50_Q6YK39 Cluster: Bacillomycin D synthetase C; n=4; Bacil... 34 4.8
UniRef50_A5IXH0 Cluster: Putative uncharacterized protein; n=1; ... 34 4.8
UniRef50_A6LW15 Cluster: ROK family protein; n=1; Clostridium be... 33 8.3
UniRef50_A0E6V9 Cluster: Chromosome undetermined scaffold_80, wh... 33 8.3
UniRef50_Q6AHZ1 Cluster: Zinc finger protein 518; n=16; Eutheria... 33 8.3
UniRef50_Q9VVU5 Cluster: COP9 signalosome complex subunit 1b; n=... 33 8.3
>UniRef50_Q8CQA8 Cluster: Surfactin synthetase; n=14;
Staphylococcus|Rep: Surfactin synthetase - Staphylococcus
epidermidis (strain ATCC 12228)
Length = 2400
Score = 36.3 bits (80), Expect = 0.90
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Query: 181 VSDLKKQYKKDRKTVKNLHEVELVKID-AALQRKLNQIRYANENFMKNSTFRDIVINGTM 239
V+D K++ + LH+V K D AL+ + Y + NS + ++ NG
Sbjct: 1447 VNDCSLDLPKNKSIQQLLHDVMKAKADDVALKMNGQSMTYQELDDYSNSMAQTLIQNGIQ 1506
Query: 240 NKSGARMLVEAYPELSSYIDATRRSGASYVPKD 272
+L E E+ + + A + G SYVP D
Sbjct: 1507 KGERVALLTERSFEMVASMIAVLKVGGSYVPID 1539
>UniRef50_Q5DDL1 Cluster: SJCHGC03901 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03901 protein - Schistosoma
japonicum (Blood fluke)
Length = 264
Score = 35.5 bits (78), Expect = 1.6
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 181 VSDLKKQYKKDRKTVKNLHEVELVKIDAALQRKLNQIRYANENFMKNSTFRDIVINGTMN 240
VS+L+K +K TV N ++E + DA +KLN I N + N +
Sbjct: 136 VSELRKWWKFTHNTVANRDQLEKIVADATFIKKLNDIMQTKINIEVEKHRKQYESNKNLT 195
Query: 241 KSGARMLVEAYPELSSYI--DATRRSGASY 268
S A E++P+L+ + + R GA +
Sbjct: 196 NSSA---FESHPKLTKVLVDELLSRIGAQF 222
>UniRef50_Q0TRY8 Cluster: Lysine-N-methylase-like protein; n=3;
Clostridium|Rep: Lysine-N-methylase-like protein -
Clostridium perfringens (strain ATCC 13124 / NCTC 8237 /
Type A)
Length = 384
Score = 35.1 bits (77), Expect = 2.1
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 8/93 (8%)
Query: 190 KDRKTVKNLHEVELVKIDAALQRKLNQIRYANENFMKNSTFRDIV---INGTMNKSGARM 246
KD+ N+H+ +L D ++ Y EN++ N F+DI+ G +N+S
Sbjct: 277 KDQNLFNNIHKYDLNSFDTYFKK----YSYIFENYLVNQIFKDIIPFNTGGDLNES-IHK 331
Query: 247 LVEAYPELSSYIDATRRSGASYVPKDYVEYDIE 279
L+ Y + SY+ S + + + + Y I+
Sbjct: 332 LINTYKLIKSYLILWNISSQNEISEKNIIYVIQ 364
>UniRef50_Q6MF19 Cluster: Phosphorylase; n=1; Candidatus
Protochlamydia amoebophila UWE25|Rep: Phosphorylase -
Protochlamydia amoebophila (strain UWE25)
Length = 867
Score = 34.7 bits (76), Expect = 2.7
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 14/102 (13%)
Query: 180 FVSDLKKQYKKDRKTVKNLHEVELVKIDAAL-----QRKLNQIRYANENFMKNSTFRDI- 233
F + ++ +Y +D + ++ L +E K+ A K+N + + +KNS F+D
Sbjct: 408 FCNAIRSRYPQDEERIRRLSIIENDKVRMANLAIVGSHKVNGVAKLHTEILKNSVFKDFY 467
Query: 234 ------VINGTMNKSGARMLVEAYPELSSYIDATRRSGASYV 269
+N T + R L+E PEL+ +I T+R G ++
Sbjct: 468 EFFPDKFVNITNGVTQRRWLLECNPELARFI--TQRIGDKWI 507
>UniRef50_Q0HIH2 Cluster: Transcriptional regulator, LysR family;
n=4; Gammaproteobacteria|Rep: Transcriptional regulator,
LysR family - Shewanella sp. (strain MR-4)
Length = 305
Score = 34.7 bits (76), Expect = 2.7
Identities = 28/137 (20%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Query: 158 LLSKTYRNGTTERXXXXXXXXXFVSDLKKQYKKDRKTVKNLHEVELVKIDAALQRKLNQI 217
L +++ + T+ + L+ ++ + T KN ++EL AL+ K+++I
Sbjct: 15 LETQSINDTATQLKTSSSAVSRTLKTLRHIFEDELLTRKN-GKMELTTKAIALREKVSRI 73
Query: 218 RYANENFMKNSTFRDIVINGT----MNKSGAR----MLVEAYPELSSYIDATRRSGASYV 269
E+ +N +F +++ MN S A+ +L++ + + I T +
Sbjct: 74 IEEIESLTENESFNPLMLTSNITIAMNASIAQWFAPLLIDHLAKNAPGIKLTIEDWSDAT 133
Query: 270 PKDYVEYDIEYGLNYYP 286
P+ E+ ++YG++Y+P
Sbjct: 134 PQHICEHRVDYGIHYFP 150
>UniRef50_Q0ZAE9 Cluster: SNARE protein; n=6; Plasmodium|Rep: SNARE
protein - Plasmodium falciparum
Length = 336
Score = 34.3 bits (75), Expect = 3.6
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Query: 181 VSDLKKQYKKDRKTVKNLHEVELVKIDAALQRKLNQIRYANENFMKNSTFRDIVINGTMN 240
+ +++K+ K R +N+ + E V++ LQR N A NF S ++ + MN
Sbjct: 47 IQEIQKKLKNYRNITENVPQHEKVRVKLMLQRLSNSYLEAVNNFQNAS--KNYINKTIMN 104
Query: 241 K-SGARMLVEAYPELSSYIDATRRSGASYVPKDYVEYDIE-YGLNYY 285
S VE E S + +R+S ++Y + +Y++ Y N+Y
Sbjct: 105 DLSTKNYNVEENMEYDSLNNFSRKSNSNY-DTNIDKYNVNIYDYNFY 150
>UniRef50_Q6YK39 Cluster: Bacillomycin D synthetase C; n=4;
Bacillus|Rep: Bacillomycin D synthetase C - Bacillus
subtilis
Length = 2619
Score = 33.9 bits (74), Expect = 4.8
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 5/105 (4%)
Query: 182 SDLKKQYKKDRKTVKNLHE--VELVKIDAALQRKLNQIRYANENFMKNSTFRDIVINGTM 239
+D +Y K+ KT+ L E E AA+ + ++ Y N N R +V G
Sbjct: 1774 NDTAAEYPKE-KTIHQLFEEQAERTPEQAAIVFEDKKLTYQVVNERANQLARTLVAKGLQ 1832
Query: 240 NKSGARMLVEAYPELSSYIDATRRSGASYVP--KDYVEYDIEYGL 282
+ ++ E PE+ I A ++G YVP DY + I Y L
Sbjct: 1833 AEELVGIMAERSPEMVIGILAILKAGGVYVPIDPDYPKERIHYML 1877
>UniRef50_A5IXH0 Cluster: Putative uncharacterized protein; n=1;
Mycoplasma agalactiae|Rep: Putative uncharacterized
protein - Mycoplasma agalactiae
Length = 178
Score = 33.9 bits (74), Expect = 4.8
Identities = 18/63 (28%), Positives = 32/63 (50%)
Query: 219 YANENFMKNSTFRDIVINGTMNKSGARMLVEAYPELSSYIDATRRSGASYVPKDYVEYDI 278
YAN +F+KN +F ++I+ N+S ++ + E +S I + DY E+D
Sbjct: 2 YANTHFIKNQSFGTLLIDSIHNQSLSKSAIPVETETTSSIYNKGVDIKNIAINDYYEFDY 61
Query: 279 EYG 281
+ G
Sbjct: 62 KQG 64
>UniRef50_A6LW15 Cluster: ROK family protein; n=1; Clostridium
beijerinckii NCIMB 8052|Rep: ROK family protein -
Clostridium beijerinckii NCIMB 8052
Length = 382
Score = 33.1 bits (72), Expect = 8.3
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 233 IVINGTMNKSGARMLVEAYPELSSYIDATRRSGASYVPKDYVEYDIEYGLN 283
I I+G K GAR +EAY ++S ID+ + +S + D E++ Y N
Sbjct: 242 IAIDGKKCKCGARGCLEAYTSMNSLIDSYNEANSSNI-SDIDEFEERYNQN 291
>UniRef50_A0E6V9 Cluster: Chromosome undetermined scaffold_80, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_80,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 347
Score = 33.1 bits (72), Expect = 8.3
Identities = 25/105 (23%), Positives = 51/105 (48%), Gaps = 16/105 (15%)
Query: 159 LSKTYRNGTTERXXXXXXXXXFVSDLKKQYKKDRKTVKNLHEVELVKIDAALQRKLNQIR 218
+ ++ +NGT R + LK++ +K++ LHE+ +L QI+
Sbjct: 177 VKESSKNGTLYRKQSLMLNDQYFDQLKQKIEKNQYNTIKLHEI---------NEELKQIK 227
Query: 219 YANEN---FMK--NSTFRDIVINGTMNK--SGARMLVEAYPELSS 256
+ NEN F++ N ++D ++N +++ + + + Y ELSS
Sbjct: 228 HVNENQKQFIENFNKAYKDYLVNNKLDEFNNQVQSICLEYDELSS 272
>UniRef50_Q6AHZ1 Cluster: Zinc finger protein 518; n=16;
Eutheria|Rep: Zinc finger protein 518 - Homo sapiens
(Human)
Length = 1483
Score = 33.1 bits (72), Expect = 8.3
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 18 EALNTTMVPGDSVNMVAARPWGVSCGDPNQHDMPWGTCMLPME 60
E L TT+ D VN VA +P + GD + + + +G C LP+E
Sbjct: 589 EVLGTTIKSPDKVNCVA-KPNAYNSGDMHNYCINYGNCELPVE 630
>UniRef50_Q9VVU5 Cluster: COP9 signalosome complex subunit 1b; n=13;
Eukaryota|Rep: COP9 signalosome complex subunit 1b -
Drosophila melanogaster (Fruit fly)
Length = 525
Score = 33.1 bits (72), Expect = 8.3
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 182 SDLKKQYKKDRKTVKNL-HEVELVKIDAALQRKL---NQIRYANENFMKNSTFRDIVING 237
+D+ K +V +L +EV + +D +Q ++ N+I +A E +NSTF +I G
Sbjct: 413 ADMHKMAMAFNSSVGDLENEVMQLILDGQIQARIDSHNKILFAKEADQRNSTFERALIMG 472
Query: 238 TMNKSGARMLVEAYPELSSYI 258
+ RMLV L S+I
Sbjct: 473 KQYQRHTRMLVLRAAMLKSHI 493
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.133 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 252,194,086
Number of Sequences: 1657284
Number of extensions: 9165151
Number of successful extensions: 22408
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 22408
Number of HSP's gapped (non-prelim): 12
length of query: 286
length of database: 575,637,011
effective HSP length: 100
effective length of query: 186
effective length of database: 409,908,611
effective search space: 76243001646
effective search space used: 76243001646
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 72 (33.1 bits)
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