Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004792-TA|BGIBMGA004792-PA|IPR001092|Basic
helix-loop-helix dimerisation region bHLH
(286 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 25 1.0
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 25 1.0
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 3.1
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 3.1
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 3.1
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 3.1
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 4.1
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 23 4.1
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 23 4.1
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 23 4.1
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 23 4.1
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 23 4.1
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 23 4.1
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 23 4.1
AY569719-1|AAS86672.1| 401|Apis mellifera complementary sex det... 23 4.1
AY569718-1|AAS86671.1| 401|Apis mellifera complementary sex det... 23 4.1
AY569715-1|AAS86668.1| 401|Apis mellifera complementary sex det... 23 4.1
AY569714-1|AAS86667.1| 401|Apis mellifera complementary sex det... 23 4.1
AY569713-1|AAS86666.1| 401|Apis mellifera complementary sex det... 23 4.1
AY569711-1|AAS86664.1| 401|Apis mellifera complementary sex det... 23 4.1
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 4.1
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 22 5.4
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 5.4
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 5.4
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.6 bits (51), Expect = 1.0
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 183 DLKKQYKKDRKTVKNLHEVELVKIDAALQRKLNQIRYANENFMKN 227
D ++Y+KDR+ K +E E + + +++ ++ R +N KN
Sbjct: 7 DRNREYRKDRRYEKLHNEKEKLLEERTNRKRNSRSREREQNSYKN 51
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.6 bits (51), Expect = 1.0
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 183 DLKKQYKKDRKTVKNLHEVELVKIDAALQRKLNQIRYANENFMKN 227
D ++Y+KDR+ K +E E + + +++ ++ R +N KN
Sbjct: 7 DRNREYRKDRRYEKLHNEKEKLLEERTNRKRNSRSREREQNSYKN 51
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 3.1
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 183 DLKKQY-KKDRKTVKNLHEVELVKIDAALQRKLNQIRYANENFMKN 227
D ++Y KKDR+ K +E E + + +++ ++ R +N KN
Sbjct: 7 DRNREYRKKDRQYEKLCNEEEKLLEERTSRKRYSRSREREQNSYKN 52
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 3.1
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 183 DLKKQY-KKDRKTVKNLHEVELVKIDAALQRKLNQIRYANENFMKN 227
D ++Y KKDR+ K +E E + + +++ ++ R +N KN
Sbjct: 7 DRNREYRKKDRQYEKLCNEEEKLLEERTSRKRYSRSREREQNSYKN 52
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 3.1
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 183 DLKKQY-KKDRKTVKNLHEVELVKIDAALQRKLNQIRYANENFMKN 227
D ++Y KKDR+ K +E E + + +++ ++ R +N KN
Sbjct: 7 DRNREYRKKDRQYEKLCNEEEKLLEERTSRKRYSRSREREQNSYKN 52
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 3.1
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 183 DLKKQY-KKDRKTVKNLHEVELVKIDAALQRKLNQIRYANENFMKN 227
D ++Y KKDR+ K +E E + + +++ ++ R +N KN
Sbjct: 7 DRNREYRKKDRQYEKLCNEEEKLLEERTSRKRYSRSREREQNSYKN 52
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.6 bits (46), Expect = 4.1
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 183 DLKKQY-KKDRKTVKNLHEVELVKIDAALQRKLNQIRYANENFMKN 227
D ++Y KKDR+ K +E E + + +++ ++ R +N KN
Sbjct: 7 DRNREYRKKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQNSYKN 52
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/50 (22%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 183 DLKKQYKKDRKTVKNLHEVELVKIDAALQRKLNQIRYANENFMKNSTFRD 232
D ++YKK + LH VE + L+ + ++ RY+ + ++++
Sbjct: 7 DRSREYKKKDRRYDQLHNVE----EKHLRERTSRRRYSRSREREQKSYKN 52
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/50 (22%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 183 DLKKQYKKDRKTVKNLHEVELVKIDAALQRKLNQIRYANENFMKNSTFRD 232
D ++YKK + LH VE + L+ + ++ RY+ + ++++
Sbjct: 7 DRSREYKKKDRRYDQLHNVE----EKHLRERTSRRRYSRSREREQKSYKN 52
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/50 (22%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 183 DLKKQYKKDRKTVKNLHEVELVKIDAALQRKLNQIRYANENFMKNSTFRD 232
D ++YKK + LH VE + L+ + ++ RY+ + ++++
Sbjct: 7 DRSREYKKKDRRYDQLHNVE----EKHLRERTSRRRYSRSREREQKSYKN 52
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/50 (22%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 183 DLKKQYKKDRKTVKNLHEVELVKIDAALQRKLNQIRYANENFMKNSTFRD 232
D ++YKK + LH VE + L+ + ++ RY+ + ++++
Sbjct: 7 DRSREYKKKDRRYDQLHNVE----EKHLRERTSRRRYSRSREREQKSYKN 52
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/50 (22%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 183 DLKKQYKKDRKTVKNLHEVELVKIDAALQRKLNQIRYANENFMKNSTFRD 232
D ++YKK + LH VE + L+ + ++ RY+ + ++++
Sbjct: 7 DRSREYKKKDRRYDQLHNVE----EKHLRERTSRRRYSRSREREQKSYKN 52
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/50 (22%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 183 DLKKQYKKDRKTVKNLHEVELVKIDAALQRKLNQIRYANENFMKNSTFRD 232
D ++YKK + LH VE + L+ + ++ RY+ + ++++
Sbjct: 7 DRSREYKKKDRRYDQLHNVE----EKHLRERTSRRRYSRSREREQKSYKN 52
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/50 (22%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 183 DLKKQYKKDRKTVKNLHEVELVKIDAALQRKLNQIRYANENFMKNSTFRD 232
D ++YKK + LH VE + L+ + ++ RY+ + ++++
Sbjct: 7 DRSREYKKKDRRYDQLHNVE----EKHLRERTSRRRYSRSREREQKSYKN 52
>AY569719-1|AAS86672.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/50 (22%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 183 DLKKQYKKDRKTVKNLHEVELVKIDAALQRKLNQIRYANENFMKNSTFRD 232
D ++YKK + LH VE + L+ + ++ RY+ + ++++
Sbjct: 256 DRSREYKKKDRRYDQLHNVE----EKHLRERTSRRRYSRSREREQKSYKN 301
>AY569718-1|AAS86671.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/50 (22%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 183 DLKKQYKKDRKTVKNLHEVELVKIDAALQRKLNQIRYANENFMKNSTFRD 232
D ++YKK + LH VE + L+ + ++ RY+ + ++++
Sbjct: 256 DRSREYKKKDRRYDQLHNVE----EKHLRERTSRRRYSRSREREQKSYKN 301
>AY569715-1|AAS86668.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/50 (22%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 183 DLKKQYKKDRKTVKNLHEVELVKIDAALQRKLNQIRYANENFMKNSTFRD 232
D ++YKK + LH VE + L+ + ++ RY+ + ++++
Sbjct: 256 DRSREYKKKDRRYDQLHNVE----EKHLRERTSRRRYSRSREREQKSYKN 301
>AY569714-1|AAS86667.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/50 (22%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 183 DLKKQYKKDRKTVKNLHEVELVKIDAALQRKLNQIRYANENFMKNSTFRD 232
D ++YKK + LH VE + L+ + ++ RY+ + ++++
Sbjct: 256 DRSREYKKKDRRYDQLHNVE----EKHLRERTSRRRYSRSREREQKSYKN 301
>AY569713-1|AAS86666.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/50 (22%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 183 DLKKQYKKDRKTVKNLHEVELVKIDAALQRKLNQIRYANENFMKNSTFRD 232
D ++YKK + LH VE + L+ + ++ RY+ + ++++
Sbjct: 256 DRSREYKKKDRRYDQLHNVE----EKHLRERTSRRRYSRSREREQKSYKN 301
>AY569711-1|AAS86664.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/50 (22%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 183 DLKKQYKKDRKTVKNLHEVELVKIDAALQRKLNQIRYANENFMKNSTFRD 232
D ++YKK + LH VE + L+ + ++ RY+ + ++++
Sbjct: 256 DRSREYKKKDRRYDQLHNVE----EKHLRERTSRRRYSRSREREQKSYKN 301
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/50 (22%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 183 DLKKQYKKDRKTVKNLHEVELVKIDAALQRKLNQIRYANENFMKNSTFRD 232
D ++YKK + LH VE + L+ + ++ RY+ + ++++
Sbjct: 256 DRSREYKKKDRRYDQLHNVE----EKHLRERTSRRRYSRSREREQKSYKN 301
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 5.4
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 183 DLKKQY-KKDRKTVKNLHEVELVKIDAALQRKLNQIRYANENFMKN 227
D ++Y KKDR+ K +E E + + +++ ++ R +N KN
Sbjct: 7 DRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSRSREREQNSYKN 52
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 215 NQIRYANENFMKNSTFRDIVIN 236
N+ Y N N+ K +++ +IN
Sbjct: 102 NKYNYNNNNYNKKLYYKNYIIN 123
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 5.4
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 183 DLKKQY-KKDRKTVKNLHEVELVKIDAALQRKLNQIRYANENFMKN 227
D ++Y KKDR+ K +E E + + +++ ++ R +N KN
Sbjct: 229 DRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSRSREREQNSYKN 274
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 5.4
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 183 DLKKQY-KKDRKTVKNLHEVELVKIDAALQRKLNQIRYANENFMKN 227
D ++Y KKDR+ K +E E + + +++ ++ R +N KN
Sbjct: 240 DRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSRSREREQNSYKN 285
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.318 0.133 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,745
Number of Sequences: 429
Number of extensions: 2799
Number of successful extensions: 26
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 18
Number of HSP's gapped (non-prelim): 25
length of query: 286
length of database: 140,377
effective HSP length: 57
effective length of query: 229
effective length of database: 115,924
effective search space: 26546596
effective search space used: 26546596
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 43 (21.4 bits)
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