Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004774-TA|BGIBMGA004774-PA|IPR000178|Initiation factor
2, IPR005225|Small GTP-binding protein domain, IPR000795|Protein
synthesis factor, GTP-binding, IPR004161|Elongation factor Tu, domain
2, IPR006689|ARF/SAR superfamily, IPR009000|Translation factor
(649 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 558 e-161
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 38 3e-04
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 38 3e-04
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 37 4e-04
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 36 8e-04
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 25 2.6
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 25 2.6
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 24 3.4
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 24 4.5
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 7.8
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 7.8
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 558 bits (1378), Expect = e-161
Identities = 293/656 (44%), Positives = 413/656 (62%), Gaps = 34/656 (5%)
Query: 1 MTVQDVADVLKKDIDHVFKVLNFADKTGMTYTKDTVIHNPQVVRDIVKISGCRFKLVARP 60
MTV+++A+ K+DI+ V VL F +K Y ++T++ ++ ++VK G + K +++
Sbjct: 62 MTVKELANSAKRDINDVLNVLYFINKNDK-YEENTILTTMPLLINVVKYLGGKHKFISKK 120
Query: 61 DAEMKDEENKDXXXXXXXXXXXXXXXXXXVCVMGHVDHGKTTLLDALRDTAVVETDFGGI 120
K ENKD V +MGHVDHGKTTLLDALR+T++ +++FGGI
Sbjct: 121 IK--KTMENKDITKRPLPNESQLIKRHPIVTIMGHVDHGKTTLLDALRNTSIAKSEFGGI 178
Query: 121 TQHIGAFEVKLPSGGKVTFLDTPGHAAFTSMRSRGAHSTDIVVLVVAADDGVMEQTLESI 180
TQ IGAF+V L SG +VTFLDTPGHAAF SMR RGAH TDIVVLVVAADDGV EQTL+SI
Sbjct: 179 TQCIGAFDVTLESGERVTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKEQTLQSI 238
Query: 181 RMAREANVPILVAINKIDKPGVNVERVLRGLAQHGVVCEQAGGEVQAVPVSALRRRNXXX 240
MA++A VPI+VAINKIDKP +++ +V LA+HG+V E+ GGE+Q V +SAL+ N
Sbjct: 239 EMAKDAKVPIIVAINKIDKPNIDIIKVQYELAKHGIVIEELGGEIQCVKISALKGINLRE 298
Query: 241 XXXXXXXXXXXXXXRADPAGQVEGVVIEALVDPRTGKQATVLVRRGTLRRGCTLVAGAGW 300
+ D G VEGV+I+ GK T L++RGTL++GC LV+G
Sbjct: 299 LTEAIIVQAELMDLKGDLEGLVEGVIIDCSNHIGRGKLVTALIQRGTLKKGCLLVSGIAS 358
Query: 301 AKVRAPTLPAKLNKYSVFKGSNNCGQVRILRSAEGASIEEAPPSCPVVVLGWRELPAAGD 360
AKVR S+F S N I +A PS V +LGW+ELP GD
Sbjct: 359 AKVR-----------SMFNDSGN-------------PILKAKPSEVVQILGWKELPNVGD 394
Query: 361 LVLEVASEKRAAEVMRWRAAQRMKEKQQSDSEVIEAKMSEHQQRYRAMLSRKRAMGRYKL 420
+LEV ++K EV+++R QR + + + K+ +H Y+ ML KR G+ +
Sbjct: 395 EILEVENDKILQEVIKFRQKQRAEILAKEHKAAADQKLEKHLIEYKKMLKIKRLFGKDRK 454
Query: 421 KPEGPREKMIKE-------DTHPALNVIVKGDVDGSVEAILDILDTYDDHERVRLDLVHF 473
+ REK+I+E + PA+N+IVKGDV GSVEA+LDI DTY +L++VH+
Sbjct: 455 IMDMVREKIIEEKRKNKNKNLTPAVNIIVKGDVAGSVEALLDIFDTYTYDTICQLNIVHY 514
Query: 474 GVGQVTPNDLEIAEAFNAIIYAFNVECPPAVAADAKDLNISVRKHNVIYRLVDDVKQEIT 533
G+G +T +D+E+A F AIIY FNV + +A +S+R +NV+Y+L+D++K+EI
Sbjct: 515 GIGFITQSDIELANTFKAIIYGFNVNATKQIKDEANKKGVSLRFYNVVYKLIDNIKKEIY 574
Query: 534 ARIPVTQTEEVIGEANVLQEFMVSEGRRKVPVAGCRCVRGSLAKNALYKIIRGQETVFEG 593
+P EE++GEA VLQ F + + +KV VAGCRCV+G L K+ LY ++RG E ++ G
Sbjct: 575 DILPEVDVEEILGEAKVLQNFDIKDKNKKVNVAGCRCVKGILLKSGLYHVLRGNENIYSG 634
Query: 594 KLVSMKHLKEEVPTIKRDQECGLKFDDPEARVQPGDTVLCYRLRDVAPRTDWDPGF 649
KL+SM+HLKEEV +I+ + ECGL+F+DP QPGDT++C ++ + +WDPGF
Sbjct: 635 KLISMRHLKEEVSSIETNYECGLRFEDPMISFQPGDTIICINIKRQKEKIEWDPGF 690
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 37.5 bits (83), Expect = 3e-04
Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 119 GITQHIGAFEVKLPSGGKVTFLDTPGHAAFTSMRSRGAHSTDIVVLVVAADDGVME---- 174
GIT I ++ + S VT +D PGH F G D VL+VAA G E
Sbjct: 13 GITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 71
Query: 175 ---QTLESIRMAREANV-PILVAINKID 198
QT E +A V ++V +NK+D
Sbjct: 72 KNGQTREHALLAFTLGVKQLIVGVNKMD 99
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 37.5 bits (83), Expect = 3e-04
Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 119 GITQHIGAFEVKLPSGGKVTFLDTPGHAAFTSMRSRGAHSTDIVVLVVAADDGVME---- 174
GIT I ++ + S VT +D PGH F G D VL+VAA G E
Sbjct: 70 GITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 128
Query: 175 ---QTLESIRMAREANV-PILVAINKID 198
QT E +A V ++V +NK+D
Sbjct: 129 KNGQTREHALLAFTLGVKQLIVGVNKMD 156
Score = 23.0 bits (47), Expect = 7.8
Identities = 8/13 (61%), Positives = 11/13 (84%)
Query: 90 VCVMGHVDHGKTT 102
+ V+GHVD GK+T
Sbjct: 10 IVVIGHVDSGKST 22
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 37.1 bits (82), Expect = 4e-04
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
Query: 137 VTFLDTPGHAAFTSMRSRGAHSTDIVVLVVAADDGVME-------QTLESIRMAREANV- 188
VT +D PGH F G D VL+VAA G E QT E +A V
Sbjct: 14 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 73
Query: 189 PILVAINKID 198
++V +NK+D
Sbjct: 74 QLIVGVNKMD 83
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 36.3 bits (80), Expect = 8e-04
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
Query: 137 VTFLDTPGHAAFTSMRSRGAHSTDIVVLVVAADDGVME-------QTLESIRMAREANV- 188
VT +D PGH F G D VL+VAA G E QT E +A V
Sbjct: 87 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQTREHALLAFTLGVK 146
Query: 189 PILVAINKID 198
++V +NK+D
Sbjct: 147 QLIVGVNKMD 156
Score = 23.0 bits (47), Expect = 7.8
Identities = 8/13 (61%), Positives = 11/13 (84%)
Query: 90 VCVMGHVDHGKTT 102
+ V+GHVD GK+T
Sbjct: 10 IVVIGHVDSGKST 22
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.6 bits (51), Expect = 2.6
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 93 MGHVDHGKTTLLDALRDTAVV 113
+GHV HGK+T++ A+ V
Sbjct: 48 IGHVAHGKSTIVKAISGVQTV 68
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 24.6 bits (51), Expect = 2.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 612 QECGLKFDDPEARVQPGDTVLCYRLRDVAP 641
Q +K P+ V PG T+L +++ V+P
Sbjct: 1001 QTANIKQQSPQQHVLPGKTLLASQIKLVSP 1030
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 24.2 bits (50), Expect = 3.4
Identities = 9/39 (23%), Positives = 23/39 (58%)
Query: 368 EKRAAEVMRWRAAQRMKEKQQSDSEVIEAKMSEHQQRYR 406
++R A +++ + Q+ +++QQ + + + +HQ R R
Sbjct: 1201 QQRNAAMVQQQQQQQQQQQQQQQQQQQQQQQQQHQARER 1239
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.8 bits (49), Expect = 4.5
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 369 KRAAEVMRWRAAQRMKEKQQSDSEVIEAKMSEHQQR 404
K + + +A Q+ +++QQ VI A+ + QQ+
Sbjct: 410 KMTEQQQQMQAQQQHQQQQQQTQHVINAQQPQQQQQ 445
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 23.0 bits (47), Expect = 7.8
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 418 YKLKPEGPREKMIKEDTHPALNVIVKGDVDGSVEAILDILDTY 460
+K PE +E +I +P GD G +E I + LD +
Sbjct: 19 WKPLPENLKEDLIVYQVYPRSFKDSNGDGIGDIEGIKEKLDHF 61
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 7.8
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 418 YKLKPEGPREKMIKEDTHPALNVIVKGDVDGSVEAILDILDTY 460
+K PE +E +I +P GD G +E I + LD +
Sbjct: 19 WKPLPENLKEDLIVYQVYPRSFKDSNGDGIGDIEGIKEKLDHF 61
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.319 0.135 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,454
Number of Sequences: 429
Number of extensions: 5767
Number of successful extensions: 24
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 18
length of query: 649
length of database: 140,377
effective HSP length: 62
effective length of query: 587
effective length of database: 113,779
effective search space: 66788273
effective search space used: 66788273
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)
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