GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004772-TA|BGIBMGA004772-PA|IPR002903|Bacterial
methyltransferase
         (305 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   2.5  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    23   4.4  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 3/39 (7%)

Query: 31  EKAKN-LAKEYPNRVIPLLGRFSELPSLLKANEITQSSI 68
           +K KN L K     V+P   RF   PS+  AN I+ SS+
Sbjct: 519 QKTKNNLMKLETTPVLP--SRFQSHPSIDSANTISNSSL 555


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 12/36 (33%), Positives = 17/36 (47%)

Query: 268 LDTPWRALNKHVDVPTDEEVESNPRSRSARLRAAIK 303
           +D      + +V  P DEE+E     R   L A+IK
Sbjct: 227 VDENINGFDPYVKTPNDEELEKPTDKRMFVLAASIK 262


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.134    0.375 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,092
Number of Sequences: 429
Number of extensions: 3307
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 2
length of query: 305
length of database: 140,377
effective HSP length: 57
effective length of query: 248
effective length of database: 115,924
effective search space: 28749152
effective search space used: 28749152
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)