Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004768-TA|BGIBMGA004768-PA|IPR013151|Immunoglobulin,
IPR007110|Immunoglobulin-like
(201 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 32 0.004
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 32 0.004
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 25 0.49
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 1.5
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 1.5
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 1.5
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 2.0
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 23 2.6
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 4.6
DQ435326-1|ABD92641.1| 132|Apis mellifera OBP9 protein. 21 6.1
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 8.1
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 31.9 bits (69), Expect = 0.004
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 4/72 (5%)
Query: 23 KQETVTLNCAVDSSPAPTSFSW---IFNSSGDQTELAANTYTSAGFTSNLRYTPISEMDF 79
+ + V L+C P PT W + SG+ EL YT L + E
Sbjct: 723 RNKHVALHCQAQGVPTPT-IVWKKATGSKSGEYEELRERAYTKILSNGTLLLQHVKEDRE 781
Query: 80 GTILCMATNTVG 91
G LC A+N +G
Sbjct: 782 GFYLCQASNGIG 793
Score = 31.1 bits (67), Expect = 0.008
Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 7/78 (8%)
Query: 23 KQETVTLNCAVDSSPAPTSFSWI------FNSSGDQTELAANTYTSAGFTSNLRYTPISE 76
K +T TL+C V P + +W+ N S + T G + L+ +
Sbjct: 821 KGDTATLHCEVHGD-TPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIAQLQISSAEA 879
Query: 77 MDFGTILCMATNTVGRQK 94
D G C A+N GR +
Sbjct: 880 SDSGAYFCQASNLYGRDQ 897
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 31.9 bits (69), Expect = 0.004
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 4/72 (5%)
Query: 23 KQETVTLNCAVDSSPAPTSFSW---IFNSSGDQTELAANTYTSAGFTSNLRYTPISEMDF 79
+ + V L+C P PT W + SG+ EL YT L + E
Sbjct: 719 RNKHVALHCQAQGVPTPT-IVWKKATGSKSGEYEELRERAYTKILSNGTLLLQHVKEDRE 777
Query: 80 GTILCMATNTVG 91
G LC A+N +G
Sbjct: 778 GFYLCQASNGIG 789
Score = 31.1 bits (67), Expect = 0.008
Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 7/78 (8%)
Query: 23 KQETVTLNCAVDSSPAPTSFSWI------FNSSGDQTELAANTYTSAGFTSNLRYTPISE 76
K +T TL+C V P + +W+ N S + T G + L+ +
Sbjct: 817 KGDTATLHCEVHGD-TPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIAQLQISSAEA 875
Query: 77 MDFGTILCMATNTVGRQK 94
D G C A+N GR +
Sbjct: 876 SDSGAYFCQASNLYGRDQ 893
Score = 26.6 bits (56), Expect = 0.16
Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 2/82 (2%)
Query: 25 ETVTLNCAVDSSPAPTSFSWIFNSSGDQTELAANTYTSAGFTSNLRYTPISEMDFGTILC 84
E TL C+V P S SW+ + + + S L +S G C
Sbjct: 626 ERTTLTCSVTRGDLPLSISWLKDGRAMGPSERVHVTNMDQYNSILMIEHLSPDHNGNYSC 685
Query: 85 MATNTVGRQKIPCLYKLIAAVP 106
+A N ++ +L+ VP
Sbjct: 686 VARNLAA--EVSHTQRLVVHVP 705
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 25.0 bits (52), Expect = 0.49
Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 4/81 (4%)
Query: 29 LNCAVDSSPAPTSFSW---IFNSSGDQTELAANTYTSAGFTSNLRYTPISEMDFGTILCM 85
+ C D P P +W ++ GD T+L + + L I + + G LC
Sbjct: 698 VECKADGFPKP-QVTWKKAAGDTPGDYTDLKLSNPDISVEDGTLSINNIQKTNEGYYLCE 756
Query: 86 ATNTVGRQKIPCLYKLIAAVP 106
A N +G ++ + A P
Sbjct: 757 AVNGIGAGLSAVIFISVQAPP 777
Score = 21.4 bits (43), Expect = 6.1
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 78 DFGTILCMATNTVGRQKIPCLYKLIA 103
D G LC+ N+VG + + + + A
Sbjct: 281 DSGKYLCIVNNSVGGESVETVLTVTA 306
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 1.5
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query: 125 YRHRSPKTCYLES-QIRSLDRVFNVHDRGVNVVR-LYNKIPQDVQNLHIHRFKKTIKEHL 182
Y++ + Y E+ + RS DR R ++ L NK + N + + + +
Sbjct: 50 YKNENSYRKYRETWKERSRDRTERERSREPKIISSLSNKTIHNNNN-YKYNYNNNNYNNN 108
Query: 183 CNKAYYKVNDYLE 195
C K YY +N Y+E
Sbjct: 109 CKKLYYNIN-YIE 120
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 1.5
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query: 125 YRHRSPKTCYLES-QIRSLDRVFNVHDRGVNVVR-LYNKIPQDVQNLHIHRFKKTIKEHL 182
Y++ + Y E+ + RS DR R ++ L NK + N + + + +
Sbjct: 50 YKNENSYRKYRETWKERSRDRTERERSREPKIISSLSNKTIHNNNN-YKYNYNNNNYNNN 108
Query: 183 CNKAYYKVNDYLE 195
C K YY +N Y+E
Sbjct: 109 CKKLYYNIN-YIE 120
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 1.5
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query: 125 YRHRSPKTCYLES-QIRSLDRVFNVHDRGVNVVR-LYNKIPQDVQNLHIHRFKKTIKEHL 182
Y++ + Y E+ + RS DR R ++ L NK + N + + + +
Sbjct: 50 YKNENSYRKYRETWKERSRDRTERERSREPKIISSLSNKTIHNNNN-YKYNYNNNNYNNN 108
Query: 183 CNKAYYKVNDYLE 195
C K YY +N Y+E
Sbjct: 109 CKKLYYNIN-YIE 120
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.0 bits (47), Expect = 2.0
Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Query: 125 YRHRSPKTCYLES-QIRSLDRVFNVHDRGVNVVRLYNKIPQDVQNLHIHRFKKTIKEHLC 183
Y++ + Y E+ + RS DR R ++ + N + + + + C
Sbjct: 50 YKNENSYRKYRETWKERSRDRTERERSREPKIISSLSNRTIHNNNNYKYNYNNNNYNNNC 109
Query: 184 NKAYYKVNDYLE 195
K YY +N Y+E
Sbjct: 110 KKLYYNIN-YIE 120
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 22.6 bits (46), Expect = 2.6
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 168 NLHIHRFKKTIKEHLCNKAYYKVNDYLEDCTK 199
+L I+ K+TI+ N+ Y +Y++ TK
Sbjct: 435 DLSINEEKRTIENEQLNRMYKSYPNYIDKETK 466
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 184 NKAYYKVNDYLED 196
NK YK NDY+ D
Sbjct: 939 NKKVYKQNDYIVD 951
>DQ435326-1|ABD92641.1| 132|Apis mellifera OBP9 protein.
Length = 132
Score = 21.4 bits (43), Expect = 6.1
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 153 VNVVRLYNKIPQDVQNLHIHRFKK--TIK-EHLCNKAYYKVNDYLE 195
V+V + +P+ +Q+ F K +I+ E C KAY V Y+E
Sbjct: 75 VDVQKALRHLPRSMQDSTKKLFNKCKSIQNEDPCEKAYQLVKCYVE 120
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.0 bits (42), Expect = 8.1
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 86 ATNTVGRQKIPCLYKLIAAVPVP 108
A TVG PC + + ++P+P
Sbjct: 459 AVATVGTTVAPCFEEPLPSLPLP 481
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.320 0.135 0.414
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,825
Number of Sequences: 429
Number of extensions: 3058
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 15
length of query: 201
length of database: 140,377
effective HSP length: 55
effective length of query: 146
effective length of database: 116,782
effective search space: 17050172
effective search space used: 17050172
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 42 (21.0 bits)
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