GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004763-TA|BGIBMGA004763-PA|undefined
         (90 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    24   0.34 
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    24   0.34 
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   1.8  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    19   7.3  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    19   9.6  

>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding
          protein ASP1 protein.
          Length = 144

 Score = 23.8 bits (49), Expect = 0.34
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 28 SNKTVAVLYAESLACSTRVYIPAGPDHRDP 57
          SN   A +Y+ +L C   +++ A PD   P
Sbjct: 3  SNTKQAFIYSLALLCLHAIFVNAAPDWVPP 32


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
          protein ASP1 protein.
          Length = 144

 Score = 23.8 bits (49), Expect = 0.34
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 28 SNKTVAVLYAESLACSTRVYIPAGPDHRDP 57
          SN   A +Y+ +L C   +++ A PD   P
Sbjct: 3  SNTKQAFIYSLALLCLHAIFVNAAPDWVPP 32


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 1.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)

Query: 23  AHICDSNKTVAVLYAESLACSTR 45
           A  CD NK V      ++ CST+
Sbjct: 946 AATCDQNKAVKKHITTTIDCSTQ 968


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
          protein.
          Length = 169

 Score = 19.4 bits (38), Expect = 7.3
 Identities = 8/26 (30%), Positives = 16/26 (61%)

Query: 26 CDSNKTVAVLYAESLACSTRVYIPAG 51
          CD + ++++L A++      V+I AG
Sbjct: 59 CDMSPSLSLLCADTRLNKLAVFIVAG 84


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 19.0 bits (37), Expect = 9.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)

Query: 28  SNKTVAVLYAESLACSTRVYIPA 50
           S +  AVL A    CS+ +  PA
Sbjct: 159 SRRRAAVLIAIVWICSSAISFPA 181


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.134    0.436 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,857
Number of Sequences: 429
Number of extensions: 1083
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 90
length of database: 140,377
effective HSP length: 48
effective length of query: 42
effective length of database: 119,785
effective search space:  5030970
effective search space used:  5030970
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (20.0 bits)
S2: 37 (19.0 bits)